RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CYP3A5P20815 502 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 BMP5P22003 454 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NR4A1P22736 598 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CYP2F1P24903 491 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 FASP25445 335 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MGAT1P26572 445 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 BMPR1AP36894 532 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GRIA1P42261 906 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GPD2P43304 727 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 BRCC3P46736 316 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ID4P47928 161 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GLUD2P49448 558 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PCYT1AP49585 367 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GPR15P49685 360 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TKTL1P51854 596 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PLA2G16P53816 162 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CDH8P55286 799 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MRPS6P82932 125 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TFAMQ00059 246 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 IFITM3Q01628 133 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GNA12Q03113 381 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 COL10A1Q03692 680 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CD69Q07108 199 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 INCA1Q0VD86 236 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ILF2Q12905 390 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TRAF2Q12933 501 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 RALGDSQ12967 914 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC12A1Q13621 1099 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 FASTKQ14296 549 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ACOX1Q15067 660 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CTF1Q16619 201 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ANO4Q32M45 955 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 INAVAQ3KP66 663 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 LRIT3Q3SXY7 679 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CCDC14Q49A88 953 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 XKR3Q5GH77 459 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PITRM1Q5JRX3 1037 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 RBM48Q5RL73 367 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CCNJQ5T5M9 372 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TSTD2Q5T7W7 516 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SDHAF4Q5VUM1 108 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TMEM198Q66K66 360 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KCTD11Q693B1 232 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TUBA3EQ6PEY2 450 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CYHR1Q6ZMK1 362 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KCTD8Q6ZWB6 473 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CATSPER4Q7RTX7 472 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KRT77Q7Z794 578 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ZC3HC1Q86WB0 502 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CMTR2Q8IYT2 770 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CENPLQ8N0S6 344 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ELMOD1Q8N336 334 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TTC39CQ8N584 583 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NKAPQ8N5F7 415 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MINDY1Q8N5J2 469 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KLHDC9Q8NEP7 349 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TRPV3Q8NET8 790 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 OR6Q1Q8NGQ2 317 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 URGCPQ8TCY9 931 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PHF10Q8WUB8 498 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 OSCP1Q8WVF1 389 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CANT1Q8WVQ1 401 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 RXFP2Q8WXD0 754 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ATL1Q8WXF7 558 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 AUTS2Q8WXX7 1259 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NDRG1Q92597 394 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CENPIQ92674 756 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 HDAC2Q92769 488 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 USP7Q93009 1102 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF566Q969W8 418 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TRIM43Q96BQ3 446 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PGBD4Q96DM1 585 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TMA16Q96EY4 203 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NRBF2Q96F24 287 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 FBXL20Q96IG2 436 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PIWIL1Q96J94 861 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 VPS39Q96JC1 886 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ELMO2Q96JJ3 720 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TNIP3Q96KP6 325 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 RPL10LQ96L21 214 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CSPG4P5Q96PW8 444 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX18Q96RF0 628 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NPAS2Q99743 824 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 HOPXQ9BPY8 73 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MTG1Q9BT17 334 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TRMOQ9BU70 441 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MSTO1Q9BUK6 570 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SNRNP25Q9BV90 132 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CPEB1Q9BZB8 566 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXD1Q9GZZ0 328 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PCDHAC1Q9H158 963 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SEMA6AQ9H2E6 1030 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 RHOJQ9H4E5 214 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 EHD1Q9H4M9 534 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 IFT22Q9H7X7 185 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CYP3A43Q9HB55 503 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms