RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 VSX2P58304 361 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-206ENST00000489451 KLC1Q07866 573 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 PRTGQ2VWP7 1150 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 WASHC2DQ5SRD0 308 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 YOD1Q5VVQ6 348 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-206ENST00000489451 FBXO42Q6P3S6 717 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 CNSTQ6PJW8 725 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 CES3Q6UWW8 571 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 NLRP9Q7RTR0 991 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 CATSPER1Q8NEC5 780 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 GRHL3Q8TE85 626 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 MAIP1Q8WWC4 291 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 PSMF1Q92530 271 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 LPGAT1Q92604 370 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 C8orf44Q96CB5 159 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 MFSD3Q96ES6 412 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 C5orf34Q96MH7 638 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 TRIM56Q9BRZ2 755 aaKnown RBP11.22□□□□□ -0.61
ACTN4-206ENST00000489451 PAK5Q9P286 719 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 TSR3Q9UJK0 312 aaKnown RBP11.22□□□□□ -0.61
ACTN4-206ENST00000489451 SLC39A10Q9ULF5 831 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 TTC7AQ9ULT0 858 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-206ENST00000489451 ZNF148Q9UQR1 794 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 PPP2R2CQ9Y2T4 447 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 SVILO95425 2214 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 IGLV3-12A0A075B6K2 115 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 HYKKA2RU49 373 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 GOLGA8KD6RF30 607 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 E7EVH7 732 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 GOLGA8TH3BQL2 631 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 FFAR3O14843 346 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 GPR42O15529 346 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 KDM1AO60341 852 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 MATN4O95460 622 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 RPN2P04844 631 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 CELA2AP08217 269 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 MGAT1P26572 445 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TSFMP43897 325 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TTPAP49638 278 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 CCZ1BP86790 482 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 CCZ1P86791 482 aaPredicted RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TYSND1Q2T9J0 566 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TUBB8Q3ZCM7 444 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 VWA2Q5GFL6 755 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 ZC3H12BQ5HYM0 836 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 AARS2Q5JTZ9 985 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TCTE1Q5JU00 501 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 ATG9BQ674R7 924 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 PTRHD1Q6GMV3 140 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 PRSS58Q8IYP2 241 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 PPHLN1Q8NEY8 458 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 STT3BQ8TCJ2 826 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TM9SF4Q92544 642 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 ZUFSPQ96AP4 578 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 RAD51AP1Q96B01 352 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 FAM136AQ96C01 138 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 TTC1Q99614 292 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 SLX1AQ9BQ83 275 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 LHPPQ9H008 270 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 MRM3Q9HC36 420 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 EIF2B3Q9NR50 452 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 SEMA3GQ9NS98 782 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 INTS7Q9NVH2 962 aaKnown RBP11.21□□□□□ -0.61
ACTN4-206ENST00000489451 SYBUQ9NX95 663 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 GNPTGQ9UJJ9 305 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 MED16Q9Y2X0 877 aa11.21□□□□□ -0.61
ACTN4-206ENST00000489451 MED13LQ71F56 2210 aa11.21□□□□□ -0.62
ACTN4-206ENST00000489451 PDZD2O15018 2839 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 ARHGEF33A8MVX0 844 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 SRPX2O60687 465 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-206ENST00000489451 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 FKBP9O95302 570 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 ZGLP1P0C6A0 271 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 COX6A1P12074 109 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 SOX11P35716 441 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 EIF3BP55884 814 aaKnown RBP11.2□□□□□ -0.62
ACTN4-206ENST00000489451 MFAP5Q13361 173 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 ZNF169Q14929 603 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-206ENST00000489451 TMED2Q15363 201 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 RBBP7Q16576 425 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 ACSBG2Q5FVE4 666 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 AGAP7PQ5VUJ5 663 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 ZNF324BQ6AW86 544 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-206ENST00000489451 SUSD1Q6UWL2 747 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 LINC00696Q6ZRV3 163 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 MPP5Q8N3R9 675 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 AMER3Q8N944 861 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 TTC29Q8NA56 475 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-206ENST00000489451 GIMAP7Q8NHV1 300 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 DNAJB14Q8TBM8 379 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 THOC3Q96J01 351 aaKnown RBP11.2□□□□□ -0.62
ACTN4-206ENST00000489451 AGAP4Q96P64 663 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 PANX3Q96QZ0 392 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 SLC30A3Q99726 388 aa11.2□□□□□ -0.62
ACTN4-206ENST00000489451 CRB3Q9BUF7 120 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms