RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TGP01266 2768 aa14.2□□□□□ -0.14
UFD1-209ENST00000489406 SCN2AQ99250 2005 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 NPIPA2E9PIF3 369 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 NPIPA3F8WFD2 350 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 PES1O00541 588 aaKnown RBP14.19□□□□□ -0.14
UFD1-209ENST00000489406 EPXP11678 715 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 EFNA3P52797 238 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 MMRN1Q13201 1228 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 KIR2DS3Q14952 304 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 NOMO1Q15155 1222 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 ZNF468Q5VIY5 522 aaPredicted RBP14.19□□□□□ -0.14
UFD1-209ENST00000489406 PLAG1Q6DJT9 500 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 ZNF585AQ6P3V2 769 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 B3GNT6Q6ZMB0 384 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 POGLUT1Q8NBL1 392 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 ZNF398Q8TD17 642 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 SLCO2A1Q92959 643 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 FATE1Q969F0 183 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 PARVAQ9NVD7 372 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.19□□□□□ -0.14
UFD1-209ENST00000489406 ZC3H7BQ9UGR2 993 aaKnown RBP14.19□□□□□ -0.14
UFD1-209ENST00000489406 RWDD2AQ9UIY3 292 aa14.19□□□□□ -0.14
UFD1-209ENST00000489406 A0A1W2PPR1 153 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 TMEM191CA6NGB0 347 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 CLCA1A8K7I4 914 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 KCNK1O00180 336 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 SPRY1O43609 319 aaPredicted RBP14.18□□□□□ -0.14
UFD1-209ENST00000489406 NDST3O95803 873 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 C8orf89P0DMQ9 161 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 RARAP10276 462 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 NID1P14543 1247 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 PRLHRP49683 370 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 MESDQ14696 234 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 BOLA3Q53S33 107 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 LGI4Q8N135 537 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 OR52N2Q8NGI0 321 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 PERPQ96FX8 193 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 CEP41Q9BYV8 373 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 DEFB127Q9H1M4 99 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 ENAMQ9NRM1 1142 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 PLSCR2Q9NRY7 297 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 C14orf105Q9NVL8 296 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 ADGRE2Q9UHX3 823 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 FAM215AQ9Y5M1 114 aa14.18□□□□□ -0.14
UFD1-209ENST00000489406 TUBAL3A6NHL2 446 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 DDX3XO00571 662 aaKnown RBP eCLIP14.17□□□□□ -0.148e-13■■□□□ 11.7
UFD1-209ENST00000489406 DNAJB6O75190 326 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 CNOT4O95628 575 aaKnown RBP14.17□□□□□ -0.14
UFD1-209ENST00000489406 PRKCIP41743 596 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 POLR2FP61218 127 aaKnown RBP14.17□□□□□ -0.14
UFD1-209ENST00000489406 DMTNQ08495 405 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 ZBTB17Q13105 803 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 C10orf62Q5T681 223 aaPredicted RBP14.17□□□□□ -0.14
UFD1-209ENST00000489406 NCBP2-AS2Q69YL0 99 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 RTL6Q6ICC9 239 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 FRMPD2BQ6IN97 320 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 ZNF449Q6P9G9 518 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 FIGLAQ6QHK4 219 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 HIPK1Q86Z02 1210 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 C2orf73Q8N5S3 287 aaPredicted RBP14.17□□□□□ -0.14
UFD1-209ENST00000489406 CCNYQ8ND76 341 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 IMP4Q96G21 291 aaKnown RBP14.17□□□□□ -0.14
UFD1-209ENST00000489406 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 PLCD4Q9BRC7 762 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 C19orf24Q9BVV8 132 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 GANQ9H2C0 597 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 ASF1AQ9Y294 204 aa14.17□□□□□ -0.14
UFD1-209ENST00000489406 EIF2S1P05198 315 aaKnown RBP14.16□□□□□ -0.14
UFD1-209ENST00000489406 JAM2P57087 298 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 PTPRCAPQ14761 206 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 PAFAH1B3Q15102 231 aaKnown RBP14.16□□□□□ -0.14
UFD1-209ENST00000489406 MUM1Q2TAK8 710 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 FIGNQ5HY92 759 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 HEPHL1Q6MZM0 1159 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 LANCL3Q6ZV70 420 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 CPEB2Q7Z5Q1 589 aaKnown RBP14.16□□□□□ -0.14
UFD1-209ENST00000489406 ZNF227Q86WZ6 799 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 LMNTD1Q8N9Z9 388 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 SPATA22Q8NHS9 363 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 C16orf52Q8NHV5 167 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 LINC01560Q8TB33 94 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 METTL21AQ8WXB1 218 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 DCUN1D1Q96GG9 259 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 PIP5K1AQ99755 562 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 YIPF4Q9BSR8 244 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 TRABDQ9H4I3 376 aa14.16□□□□□ -0.14
UFD1-209ENST00000489406 ZNF407Q9C0G0 2248 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 LOC105369274A0A096LPK9 316 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 LOC102723532A0A0G2JNH3 316 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 MBD3L4A6NDZ8 208 aaPredicted RBP14.15□□□□□ -0.14
UFD1-209ENST00000489406 MBD3L5A6NJ08 208 aaPredicted RBP14.15□□□□□ -0.14
UFD1-209ENST00000489406 SRPX2O60687 465 aaPredicted RBP14.15□□□□□ -0.14
UFD1-209ENST00000489406 CTSVO60911 334 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 HRGP04196 525 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 HSP90AA1P07900 732 aaKnown RBP14.15□□□□□ -0.14
UFD1-209ENST00000489406 CD48P09326 243 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 PCK1P35558 622 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 KRT81Q14533 505 aa14.15□□□□□ -0.14
UFD1-209ENST00000489406 SYT16Q17RD7 645 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms