RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC35F4A4IF30 521 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 CH25HO95992 272 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 HOXD13P35453 343 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 ADAM8P78325 824 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 RFTN1Q14699 578 aaPredicted RBP17.19■□□□□ 0.34
NPHP4-209ENST00000489180 PLD6Q8N2A8 252 aaKnown RBP17.19■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF366Q8N895 744 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 GRPEL2Q8TAA5 225 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 SLC32A1Q9H598 525 aa17.19■□□□□ 0.34
NPHP4-209ENST00000489180 FBRSL1Q9HCM7 1045 aaKnown RBP17.19■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF598Q86UK7 904 aaKnown RBP17.18■□□□□ 0.34
NPHP4-209ENST00000489180 NUS1Q96E22 293 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 GPR22Q99680 433 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ZDHHC3Q9NYG2 299 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 UPB1Q9UBR1 384 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 GBAP04062 536 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 RPS3AP61247 264 aaKnown RBP17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF234Q14588 700 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 DUOXA1Q1HG43 343 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 DLK2Q6UY11 383 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ERMP1Q7Z2K6 904 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 AMZ2Q86W34 360 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 LGR4Q9BXB1 951 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 PCBD2Q9H0N5 130 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 H3BSH0 61 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 PDCD5O14737 125 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 PIGRP01833 764 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 C8BP07358 591 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF823P16415 610 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ACSL1P33121 698 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 FRG2Q64ET8 278 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ANKRD26P1Q6NSI1 321 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 SYCE2Q6PIF2 218 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 FRG2BQ96QU4 278 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 KXD1Q9BQD3 176 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 MYOCOSA0A1B0GUC4 107 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 PLOD2O00469 737 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 CPNE3O75131 537 aaKnown RBP17.18■□□□□ 0.34
NPHP4-209ENST00000489180 CLDN7O95471 211 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 PTPN2P17706 415 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 SP140Q13342 867 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 PPP1R3AQ16821 1122 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 EIPR1Q53HC9 387 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 SLITRK4Q8IW52 837 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 COQ8BQ96D53 544 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 HSH2DQ96JZ2 352 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 FRMD6Q96NE9 622 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 SUV39H2Q9H5I1 410 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 SMURF2Q9HAU4 748 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF304Q9HCX3 659 aa17.18■□□□□ 0.34
NPHP4-209ENST00000489180 A0A1W2PRU2 124 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 PRORSD1PA6NEY8 169 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 KDM4BO94953 1096 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 ZNF8P17098 575 aaPredicted RBP17.17■□□□□ 0.34
NPHP4-209ENST00000489180 KCNQ1P51787 676 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 SLC35G1Q2M3R5 365 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 TOR1AIP1Q5JTV8 583 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 PRPF38BQ5VTL8 546 aaKnown RBP17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CD99L2Q8TCZ2 262 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CLCC1Q96S66 551 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 B3GNT4Q9C0J1 378 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 OSBPL2Q9H1P3 480 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 EVA1BQ9NVM1 165 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 ACTR3BQ9P1U1 418 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CFL2Q9Y281 166 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 POFUT2Q9Y2G5 429 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 MANBAO00462 879 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 SOX14O95416 240 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 C8AP07357 584 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 GSTT2BP0CG30 244 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 MBOAT1Q6ZNC8 495 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 PQLC3Q8N755 202 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 SPERTQ8NA61 448 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 SLC35F5Q8WV83 523 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 SLC25A36Q96CQ1 311 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 PYURFQ96I23 114 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 RNF11Q9Y3C5 154 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 SMAD9O15198 467 aaKnown RBP17.17■□□□□ 0.34
NPHP4-209ENST00000489180 BCAS2O75934 225 aaPredicted RBP17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CHRM1P11229 460 aaPredicted RBP17.17■□□□□ 0.34
NPHP4-209ENST00000489180 C6orf89Q6UWU4 347 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 BCO2Q9BYV7 579 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 BRD7Q9NPI1 651 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 ACP5P13686 325 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 MAN2A2P49641 1150 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 FKBP1BP68106 108 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 RHDQ02161 417 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 C4orf46Q504U0 113 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 ARL9Q6T311 187 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CLDN19Q8N6F1 224 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CYB5D2Q8WUJ1 264 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CRELD1Q96HD1 420 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 RHCGQ9UBD6 479 aa17.17■□□□□ 0.34
NPHP4-209ENST00000489180 CREG1O75629 220 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 ATF6P18850 670 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 ELK4P28324 431 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 CCR8P51685 355 aa17.16■□□□□ 0.34
NPHP4-209ENST00000489180 CLCN7P51798 805 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms