RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PNLIPRP1P54315 467 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 MPP1Q00013 466 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 SRSF1Q07955 248 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 NKG7Q16617 165 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 TTLL9Q3SXZ7 439 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 PRR30Q53SZ7 412 aaPredicted RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 HSP90AA5PQ58FG0 334 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 RNASEH2BQ5TBB1 312 aaKnown RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 VWA5B1Q5TIE3 1220 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 YOD1Q5VVQ6 348 aaPredicted RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 CYHR1Q6ZMK1 362 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 NEK10Q6ZWH5 1172 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 GALNT16Q8N428 558 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 EFCAB3Q8N7B9 438 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 PPFIBP2Q8ND30 876 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ASB11Q8WXH4 323 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 INPP5DQ92835 1189 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 COL26A1Q96A83 441 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 FKBP10Q96AY3 582 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 GPR21Q99679 349 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 KCNF1Q9H3M0 494 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 SOX17Q9H6I2 414 aaPredicted RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 MRPS30Q9NP92 439 aaKnown RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ATP13A2Q9NQ11 1180 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 SLAMF7Q9NQ25 335 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ENAMQ9NRM1 1142 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 IARS2Q9NSE4 1012 aaKnown RBP11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 ABCF3Q9NUQ8 709 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 KLHL42Q9P2K6 505 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 CTSFQ9UBX1 484 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 DHRS7Q9Y394 339 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 MAP4K5Q9Y4K4 846 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 HECTD1Q9ULT8 2610 aa11.41□□□□□ -0.58
CCHCR1-215ENST00000488920 SPENQ96T58 3664 aaKnown RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 NBASA2RRP1 2371 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 FLNCQ14315 2725 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 IGKV1-8A0A0C4DH67 115 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 OR2A25A4D2G3 310 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 H0YGG7 62 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 AGPSO00116 658 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ALOX12BO75342 701 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 VPS4BO75351 444 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 BANF1O75531 89 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SORBS2O94875 1100 aaKnown RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC16A8O95907 504 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ERVK-10P10266 1014 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 GNLYP22749 145 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 MMP11P24347 488 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 HSD17B2P37059 387 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 UQCRFS1P47985 274 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ARF3P61204 181 aaPredicted RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 MYBPC3Q14896 1274 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ARHGAP19Q14CB8 494 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 INPP5JQ15735 1006 aaPredicted RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 PLEKHN1Q494U1 663 aaPredicted RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC6A19Q695T7 634 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 RNF44Q7L0R7 432 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 PRSS58Q8IYP2 241 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 Q8NA96 180 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 CALML6Q8TD86 181 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF480Q8WV37 535 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 KCNJ9Q92806 393 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SPSB2Q99619 263 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ZFYVE21Q9BQ24 234 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 PLCD4Q9BRC7 762 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 DDX47Q9H0S4 455 aaKnown RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SLC26A1Q9H2B4 701 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF552Q9H707 407 aaPredicted RBP11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 WDR54Q9H977 334 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 SYNPO2LQ9H987 977 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ZNF304Q9HCX3 659 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 C5AR2Q9P296 337 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 MAP10Q9P2G4 905 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 ASIC3Q9UHC3 531 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 TAC3Q9UHF0 121 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 FBXL4Q9UKA2 621 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 VPS4AQ9UN37 437 aa11.4□□□□□ -0.58
CCHCR1-215ENST00000488920 MED13Q9UHV7 2174 aa11.4□□□□□ -0.59
CCHCR1-215ENST00000488920 TNRC6AQ8NDV7 1962 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CLEC18AA5D8T8 446 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 VSTM2BA6NLU5 285 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 ZNF839A8K0R7 811 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 E7ENX8 843 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 GFYI3L273 518 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 SMAPO00193 183 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CES2O00748 559 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 SOCS6O14544 535 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 ZBTB14O43829 449 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 ALPPP05187 535 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 MPC1LP0DKB6 136 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 PGAM1P18669 254 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 TAP2Q03519 686 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 PRDX1Q06830 199 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 AIMP2Q13155 320 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 NAA25Q14CX7 972 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 PRTGQ2VWP7 1150 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 MSS51Q4VC12 460 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 ICE2Q659A1 982 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 KIRREL2Q6UWL6 708 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms