RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 ERV3-1Q14264 604 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 NAA25Q14CX7 972 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 PTCHD3Q3KNS1 767 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 LINC00303Q3SY05 128 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 CRTC2Q53ET0 693 aaPredicted RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 THEMIS2Q5TEJ8 643 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 TMEM207Q6UWW9 146 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 ZNF517Q6ZMY9 492 aaPredicted RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 LRRC56Q8IYG6 542 aaPredicted RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 VPS39Q96JC1 886 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 HIST1H2AHQ96KK5 128 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 CATSPER2Q96P56 530 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 HIST1H2AJQ99878 128 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 MCMBPQ9BTE3 642 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 H2AFJQ9BTM1 129 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 NDC1Q9BTX1 674 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 TRIM54Q9BYV2 358 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 ACTL8Q9H568 366 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 LRRC4CQ9HCJ2 640 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 TXLNGQ9NUQ3 528 aa13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 STOX2Q9P2F5 926 aaPredicted RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 DMGDHQ9UI17 866 aaKnown RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 FARSAQ9Y285 508 aaKnown RBP13.59□□□□□ -0.23
PFKFB3-213ENST00000487989 PABPN1LA6NDY0 278 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 TK2O00142 265 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 NRP2O60462 931 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 CCNDBP1O95273 360 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 ZNF37AP17032 561 aaPredicted RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 AGXTP21549 392 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 VSX2P58304 361 aaPredicted RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 RPS18P62269 152 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 ABATP80404 500 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 COL9A2Q14055 689 aaPredicted RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 LY6DQ14210 128 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 ZNF460Q14592 562 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 PHKG1Q16816 387 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 GLE1Q53GS7 698 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 TCTE1Q5JU00 501 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 ATP1A1-AS1Q5TC04 95 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 C1orf189Q5VU69 101 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 ICE2Q659A1 982 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 RHBDD2Q6NTF9 364 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 BORAQ6PGQ7 559 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 MBOAT1Q6ZNC8 495 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 CTAGE3PQ8IX95 158 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 NKAPQ8N5F7 415 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 PDLIM5Q96HC4 596 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 CPNE1Q99829 537 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 SELENOSQ9BQE4 189 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 STARD5Q9NSY2 213 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 DHCR7Q9UBM7 475 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 SNX7Q9UNH6 387 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 SRPK3Q9UPE1 567 aa13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
PFKFB3-213ENST00000487989 IGKV1-8A0A0C4DH67 115 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 A0A0J9YVX5 310 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 OR2A25A4D2G3 310 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 SRPX2O60687 465 aaPredicted RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 RECKO95980 971 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 RAB40ALP0C0E4 278 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ALAS2P22557 587 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 STX2P32856 288 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 GP5P40197 560 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ARSFP54793 590 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 DCDP81605 110 aaKnown RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 POU4F1Q01851 419 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 KBTBD12Q3ZCT8 623 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 WASHC2DQ5SRD0 308 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ZNF385CQ66K41 422 aaPredicted RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 FRMPD2BQ6IN97 320 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 FBXO42Q6P3S6 717 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 AGTRAPQ6RW13 159 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 PAQR7Q86WK9 346 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 CEP97Q8IW35 865 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 CEP112Q8N8E3 955 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ENDOVQ8N8Q3 282 aaKnown RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 FBF1Q8TES7 1133 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ALKBH8Q96BT7 664 aaKnown RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 MED8Q96G25 268 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 GBP5Q96PP8 586 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 RBBP8Q99708 897 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 PLCD4Q9BRC7 762 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 NLNQ9BYT8 704 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ATG10Q9H0Y0 220 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 GPAMQ9HCL2 828 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 CCDC177Q9NQR7 707 aaPredicted RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ARL15Q9NXU5 204 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 UTP6Q9NYH9 597 aaKnown RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 ANKMY1Q9P2S6 941 aa13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 MTRF1LQ9UGC7 380 aaKnown RBP13.57□□□□□ -0.24
PFKFB3-213ENST00000487989 CFAP46Q8IYW2 2715 aa13.56□□□□□ -0.24
PFKFB3-213ENST00000487989 BOD1L1Q8NFC6 3051 aa13.56□□□□□ -0.24
PFKFB3-213ENST00000487989 SMG1Q96Q15 3661 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms