RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 TMPRSS11BQ86T26 416 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 MMD2Q8IY49 270 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 TDRD5Q8NAT2 981 aaKnown RBP3.1□□□□□ -1.91
CCDC66-221ENST00000487739 MCUQ8NE86 351 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 CYYR1Q96J86 154 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 SFXN2Q96NB2 322 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 MTHFD2LQ9H903 347 aaPredicted RBP3.1□□□□□ -1.91
CCDC66-221ENST00000487739 IGHV4-30-2A0A087WSY4 118 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 A0A087WUV0 522 aaPredicted RBP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 SHISA7A6NL88 538 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 SHISA9B4DS77 424 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 FPGTO14772 594 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 ARPC2O15144 300 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PTP4A3O75365 173 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 HPP00738 406 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 BCL3P20749 454 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PAX3P23760 479 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 ETV5P41161 510 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 MATR3P43243 847 aaKnown RBP eCLIP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 MYL7Q01449 175 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PHKG1Q16816 387 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 MS4A18Q3C1V0 323 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PLEKHS1Q5SXH7 462 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 GPD1LQ8N335 351 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 KLHDC1Q8N7A1 406 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 SUMF1Q8NBK3 374 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 C9orf43Q8TAL5 461 aaPredicted RBP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PTPMT1Q8WUK0 201 aaPredicted RBP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PIGBQ92521 554 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 SYN2Q92777 582 aaPredicted RBP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 SLAMF9Q96A28 289 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 CNRIP1Q96F85 164 aaPredicted RBP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 THOC1Q96FV9 657 aaKnown RBP3.09□□□□□ -1.91
CCDC66-221ENST00000487739 CHCHD5Q9BSY4 110 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PARLQ9H300 379 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 SYNCQ9H7C4 482 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 EQTNQ9NQ60 294 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 GTSE1Q9NYZ3 720 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 TSPAN16Q9UKR8 245 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 CELA1Q9UNI1 258 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 TMED3Q9Y3Q3 217 aa3.09□□□□□ -1.91
CCDC66-221ENST00000487739 LOC100509620A0A075B734 347 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 SNURFLB1AK76 121 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 EPB41L2O43491 1005 aaKnown RBP3.08□□□□□ -1.92
CCDC66-221ENST00000487739 BCL10O95999 233 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 GP1BBP13224 206 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 TRIM21P19474 475 aaKnown RBP3.08□□□□□ -1.92
CCDC66-221ENST00000487739 DNA2P51530 1060 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 ALDH3A2P51648 485 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 TRA2BP62995 288 aaKnown RBP3.08□□□□□ -1.92
CCDC66-221ENST00000487739 EXT1Q16394 746 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 EIPR1Q53HC9 387 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 CCDC30Q5VVM6 783 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 TMEM211Q6ICI0 200 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 CCDC70Q6NSX1 233 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 CEACAM19Q7Z692 300 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 PHC2Q8IXK0 858 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 LGI2Q8N0V4 545 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 THAP8Q8NA92 274 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 LPGAT1Q92604 370 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 SPDL1Q96EA4 605 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF597Q96LX8 424 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 OPA3Q9H6K4 179 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF107Q9UII5 783 aaPredicted RBP3.08□□□□□ -1.92
CCDC66-221ENST00000487739 LNPEPQ9UIQ6 1025 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 R4GN57 208 aa3.08□□□□□ -1.92
CCDC66-221ENST00000487739 GPR75-ASB3A0A0A6YYF3 556 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 SNAP91O60641 907 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 GALR3O60755 368 aaPredicted RBP3.07□□□□□ -1.92
CCDC66-221ENST00000487739 TNFAIP3P21580 790 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 SOX3P41225 446 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 CLCN4P51793 760 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 SGCGQ13326 291 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 TMEM132DQ14C87 1099 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 PTPN14Q15678 1187 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 FAM189A2Q15884 450 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 C15orf59Q2T9L4 293 aaPredicted RBP3.07□□□□□ -1.92
CCDC66-221ENST00000487739 IGSF11Q5DX21 431 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 FAM182AQ5T1J6 154 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 ADCK1Q86TW2 530 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 KBTBD6Q86V97 674 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 GUF1Q8N442 669 aaKnown RBP3.07□□□□□ -1.92
CCDC66-221ENST00000487739 OR7A2PQ8NGA2 310 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 SEPHS2Q99611 448 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 ATF6BQ99941 703 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 TLE6Q9H808 572 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 ABCB10Q9NRK6 738 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 CLIP2Q9UDT6 1046 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 PADI2Q9Y2J8 665 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 SELENOKQ9Y6D0 94 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 HCFC1P51610 2035 aa3.07□□□□□ -1.92
CCDC66-221ENST00000487739 LOC102723996A0A087X1L8 192 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-221ENST00000487739 K7EQD1 137 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 TOMM70O94826 608 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 IGHV2-70P01814 119 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 DANCRP0C864 163 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 OR3A2P47893 321 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 NRIP1P48552 1158 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms