RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ITGA3P26006 1051 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 VARSP26640 1264 aaKnown RBP22.56■■□□□ 1.2
PLOD3-215ENST00000487563 AIMP2Q13155 320 aaKnown RBP22.56■■□□□ 1.2
PLOD3-215ENST00000487563 CTBP1Q13363 440 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 CYP1B1Q16678 543 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 IRAK1BP1Q5VVH5 260 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 SUSD1Q6UWL2 747 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 SHISA6Q6ZSJ9 500 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 RNF44Q7L0R7 432 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 DENND6AQ8IWF6 608 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 Q8NA96 180 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 GRK7Q8WTQ7 553 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 COL26A1Q96A83 441 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 SPSB2Q99619 263 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 ZFYVE21Q9BQ24 234 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 SLC26A1Q9H2B4 701 aa22.56■■□□□ 1.2
PLOD3-215ENST00000487563 MRPS30Q9NP92 439 aaKnown RBP22.56■■□□□ 1.2
PLOD3-215ENST00000487563 C20orf96Q9NUD7 363 aaPredicted RBP22.56■■□□□ 1.2
PLOD3-215ENST00000487563 SPENQ96T58 3664 aaKnown RBP22.55■■□□□ 1.2
PLOD3-215ENST00000487563 RELNP78509 3460 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 CYSRT1A8MQ03 144 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 MYO1CO00159 1063 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 KIF5CO60282 957 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 VPS26AO75436 327 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 CCNDBP1O95273 360 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 ONECUT2O95948 504 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 F7P08709 466 aaPredicted RBP22.55■■□□□ 1.2
PLOD3-215ENST00000487563 SRSF1Q07955 248 aaKnown RBP eCLIP22.55■■□□□ 1.2
PLOD3-215ENST00000487563 ARHGAP19Q14CB8 494 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 RBBP7Q16576 425 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 LONRF1Q17RB8 773 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 REXO1L1PQ8IX06 675 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 CALML6Q8TD86 181 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 VPS50Q96JG6 964 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 ILKAPQ9H0C8 392 aaPredicted RBP22.55■■□□□ 1.2
PLOD3-215ENST00000487563 ZNF304Q9HCX3 659 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 SLC6A20Q9NP91 592 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 ENAMQ9NRM1 1142 aa22.55■■□□□ 1.2
PLOD3-215ENST00000487563 LOC105369274A0A096LPK9 316 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 LOC102723532A0A0G2JNH3 316 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 OR2A25A4D2G3 310 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 PHF2O75151 1096 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 AGFG2O95081 481 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 SYF2O95926 243 aaKnown RBP22.54■■□□□ 1.2
PLOD3-215ENST00000487563 ERGP11308 486 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 HSD17B2P37059 387 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 SLC1A2P43004 574 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 CLCN7P51798 805 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 PNLIPRP1P54315 467 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 OCA2Q04671 838 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 CUL1Q13616 776 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 MUM1Q2TAK8 710 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 FHL5Q5TD97 284 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 NEK10Q6ZWH5 1172 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 LMNTD2Q8IXW0 634 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 IQCKQ8N0W5 287 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 OR4N4Q8N0Y3 316 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 ZADH2Q8N4Q0 377 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 KCNJ9Q92806 393 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 CABS1Q96KC9 395 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 PKP4Q99569 1192 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 SLC30A3Q99726 388 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 ZNF552Q9H707 407 aaPredicted RBP22.54■■□□□ 1.2
PLOD3-215ENST00000487563 ABCF3Q9NUQ8 709 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 UTP6Q9NYH9 597 aaKnown RBP22.54■■□□□ 1.2
PLOD3-215ENST00000487563 TAC3Q9UHF0 121 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 B3GNT3Q9Y2A9 372 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 COL12A1Q99715 3063 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 ANKRD12Q6UB98 2062 aa22.54■■□□□ 1.2
PLOD3-215ENST00000487563 ZCWPW2A0A1B0GU75 182 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 ALOX12BO75342 701 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 YBX1P67809 324 aaKnown RBP22.53■■□□□ 1.2
PLOD3-215ENST00000487563 PPP1R7Q15435 360 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 TUBB8Q3ZCM7 444 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 PRAMEF13Q5VWM6 474 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 PRMT9Q6P2P2 845 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 SLC35F6Q8N357 371 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 DTWD1Q8N5C7 304 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 OSBPL9Q96SU4 736 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 CRB3Q9BUF7 120 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 SEMA3GQ9NS98 782 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 KLHL42Q9P2K6 505 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 HS3ST3B1Q9Y662 390 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 COMMD10Q9Y6G5 202 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 NUP210LQ5VU65 1888 aa22.53■■□□□ 1.2
PLOD3-215ENST00000487563 RP1L1Q8IWN7 2480 aaPredicted RBP22.53■■□□□ 1.2
PLOD3-215ENST00000487563 BLACEA4D250 179 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 SOCS6O14544 535 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 SLC16A8O95907 504 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 MPC1LP0DKB6 136 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 ENO3P13929 434 aaPredicted RBP22.52■■□□□ 1.2
PLOD3-215ENST00000487563 FBLP22087 321 aaKnown RBP22.52■■□□□ 1.2
PLOD3-215ENST00000487563 FNTAP49354 379 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 SOX8P57073 446 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 PLEKHN1Q494U1 663 aaPredicted RBP22.52■■□□□ 1.2
PLOD3-215ENST00000487563 ICE2Q659A1 982 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 ADCK2Q7Z695 626 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 PPIL6Q8IXY8 311 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 PRSS58Q8IYP2 241 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 NAT8LQ8N9F0 302 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms