RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GPN3Q9UHW5 284 aaPredicted RBP10.97□□□□□ -0.65
SPEN-205ENST00000487496 TRMT6Q9UJA5 497 aaKnown RBP10.97□□□□□ -0.65
SPEN-205ENST00000487496 ANAPC2Q9UJX6 822 aa10.97□□□□□ -0.65
SPEN-205ENST00000487496 PTRH2Q9Y3E5 179 aaKnown RBP10.97□□□□□ -0.65
SPEN-205ENST00000487496 TEX264Q9Y6I9 313 aa10.97□□□□□ -0.65
SPEN-205ENST00000487496 LOC105369274A0A096LPK9 316 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 IGKV1-8A0A0C4DH67 115 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 LOC102723532A0A0G2JNH3 316 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 A0A1B0GX78 115 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 ZNF839A8K0R7 811 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 DSCR3O14972 297 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 CNOT3O75175 753 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 WISP1O95388 367 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 SYF2O95926 243 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 ONECUT2O95948 504 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 PDGFAP04085 211 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 OTX2P32243 289 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 RPA3P35244 121 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 CASRP41180 1078 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 FOLR3P41439 243 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 SKIV2L2P42285 1042 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 FOXL2P58012 376 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 VSX2P58304 361 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 PRDX1Q06830 199 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 TSTA3Q13630 321 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 ATP1A4Q13733 1029 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 NAA25Q14CX7 972 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 HIF1AQ16665 826 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 FAM214AQ32MH5 1076 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 WASHC2DQ5SRD0 308 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 RBM20Q5T481 1227 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 TEDDM1Q5T9Z0 273 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 ICE2Q659A1 982 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 UGT3A1Q6NUS8 523 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 TRMT10BQ6PF06 316 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 KIAA0408Q6ZU52 694 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 ASB18Q6ZVZ8 466 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 UBE2R2Q712K3 238 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 RNF44Q7L0R7 432 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 GALNT7Q86SF2 657 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 RAB43Q86YS6 212 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 TMEM151BQ8IW70 566 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 LRRC56Q8IYG6 542 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 OR4N4Q8N0Y3 316 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 TTC29Q8NA56 475 aaPredicted RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 OR2Y1Q8NGV0 311 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 EEF1AKMT1Q8WVE0 214 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 PTERQ96BW5 349 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 LRRC39Q96DD0 335 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 CFAP36Q96G28 342 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 SNF8Q96H20 258 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 KRT12Q99456 494 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 SLC25A23Q9BV35 468 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 MRPS30Q9NP92 439 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 PPANQ9NQ55 473 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 TAS2R13Q9NYV9 303 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 SLC17A6Q9P2U8 582 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 TAC3Q9UHF0 121 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 CHMP2BQ9UQN3 213 aa10.96□□□□□ -0.65
SPEN-205ENST00000487496 PCDHGA9Q9Y5G4 932 aaKnown RBP10.96□□□□□ -0.65
SPEN-205ENST00000487496 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
SPEN-205ENST00000487496 FER1L5A0AVI2 2057 aa10.96□□□□□ -0.66
SPEN-205ENST00000487496 BOD1L1Q8NFC6 3051 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 HYKKA2RU49 373 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 EFCAB8A8MWE9 144 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 CEACAM4O75871 244 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 PIM1P11309 404 aaPredicted RBP10.95□□□□□ -0.66
SPEN-205ENST00000487496 IMPA1P29218 277 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 RPL21P46778 160 aaKnown RBP10.95□□□□□ -0.66
SPEN-205ENST00000487496 RGS4P49798 205 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 CDKN2DP55273 166 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 ARL4CP56559 192 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 MRPS25P82663 173 aaKnown RBP10.95□□□□□ -0.66
SPEN-205ENST00000487496 TLE1Q04724 770 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 KLRB1Q12918 225 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 STEAP4Q687X5 459 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 ZNF425Q6IV72 752 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 LRRC8EQ6NSJ5 796 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 PAQR3Q6TCH7 311 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 MED25Q71SY5 747 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 OVCH1Q7RTY7 1134 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 MRGPREQ86SM8 312 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 PAQR7Q86WK9 346 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 TMEM102Q8N9M5 508 aaPredicted RBP10.95□□□□□ -0.66
SPEN-205ENST00000487496 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.95□□□□□ -0.66
SPEN-205ENST00000487496 FKBP10Q96AY3 582 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 IP6K3Q96PC2 410 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 ZFYVE21Q9BQ24 234 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 PLCD4Q9BRC7 762 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 EPN3Q9H201 632 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 MLXIPLQ9NP71 852 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 ANKMY1Q9P2S6 941 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 ADAMTS6Q9UKP5 1117 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 SNX24Q9Y343 169 aa10.95□□□□□ -0.66
SPEN-205ENST00000487496 E7ESA3 106 aa10.94□□□□□ -0.66
SPEN-205ENST00000487496 H0YGG7 62 aa10.94□□□□□ -0.66
SPEN-205ENST00000487496 CCNDBP1O95273 360 aa10.94□□□□□ -0.66
SPEN-205ENST00000487496 MED26O95402 600 aa10.94□□□□□ -0.66
SPEN-205ENST00000487496 ALBP02768 609 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms