RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TMCO3Q6UWJ1 677 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 IGFL3Q6UXB1 125 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 ZNF662Q6ZS27 426 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 MARK2Q7KZI7 788 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 CHST15Q7LFX5 561 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 IRF2BP2Q7Z5L9 587 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TMEM135Q86UB9 458 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TRIM74Q86UV6 250 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 PPP1R3BQ86XI6 285 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 KMT5CQ86Y97 462 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 PAF1Q8N7H5 531 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 GLIS1Q8NBF1 620 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 OR8K5Q8NH50 307 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 ARRDC2Q8TBH0 407 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 DTX3LQ8TDB6 740 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 CT55Q8WUE5 264 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 PDCD6IPQ8WUM4 868 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TEKT4Q8WW24 435 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 PNPLA2Q96AD5 504 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 ZDHHC12Q96GR4 267 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TSGA13Q96PP4 275 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 CSPG4P5Q96PW8 444 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 CD180Q99467 661 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 SMAD5Q99717 465 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TIMM29Q9BSF4 260 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 SLC25A23Q9BV35 468 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TDRD1Q9BXT4 1180 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 SLC29A3Q9BZD2 475 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 XPO4Q9C0E2 1151 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 POLR1EQ9GZS1 481 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TWSG1Q9GZX9 223 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 FAM83DQ9H4H8 585 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 ACTL8Q9H568 366 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 NLRC4Q9NPP4 1024 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 GPATCH2LQ9NWQ4 482 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 C14orf119Q9NWQ9 140 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 C5AR2Q9P296 337 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 ATXN10Q9UBB4 475 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 TRPS1Q9UHF7 1281 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 CD84Q9UIB8 345 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 ERRFI1Q9UJM3 462 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 KCNK6Q9Y257 313 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 SEC16AO15027 2179 aa4.97□□□□□ -1.61
R3HDM1-218ENST00000487294 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 LGALS16A8MUM7 142 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ANKRD66B4E2M5 251 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 KMOO15229 486 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 DPM1O60762 260 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 FAM20BO75063 409 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 KATNA1O75449 491 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 DNAJB5O75953 348 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 CLDN7O95471 211 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 CBX6O95503 412 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 VIPP01282 170 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ATP1A1P05023 1023 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ACP5P13686 325 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 BRAFP15056 766 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 FERP16591 822 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF8P17098 575 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 CTPS1P17812 591 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 CA4P22748 312 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 IL1R2P27930 398 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 TNFRSF8P28908 595 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 CASP14P31944 242 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 LEPRP48357 1165 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 KLK7P49862 253 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 RIPPLY3P57055 190 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 SOX8P57073 446 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 MAXP61244 160 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 RPS15P62841 145 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ACY1Q03154 408 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 DMPKQ09013 629 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 GALNT2Q10471 571 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 FAPQ12884 760 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 FHL2Q14192 279 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 PAFAH1B3Q15102 231 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 SYCP1Q15431 976 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 MUM1Q2TAK8 710 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 NADK2Q4G0N4 442 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ANKRD20A8PQ5CZ79 823 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ZRANB3Q5FWF4 1079 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 PPP6R3Q5H9R7 873 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 RABL3Q5HYI8 236 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 PWWP2BQ6NUJ5 590 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 MED25Q71SY5 747 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 DOK3Q7L591 496 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 APTXQ7Z2E3 356 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 C11orf96Q7Z7L8 435 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 RASGRP3Q8IV61 690 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF547Q8IVP9 402 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 RHOT1Q8IXI2 618 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ATPAF2Q8N5M1 289 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 NIPA2Q8N8Q9 360 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 GLB1L3Q8NCI6 653 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 OR52N2Q8NGI0 321 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 COG1Q8WTW3 980 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 NSMCE1Q8WV22 266 aa4.96□□□□□ -1.62
R3HDM1-218ENST00000487294 ZFPM2Q8WW38 1151 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms