RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ISL2Q96A47 359 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 KIAA1191Q96A73 305 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 LRFN5Q96NI6 719 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 DPH2Q9BQC3 489 aaPredicted RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 SGPP1Q9BX95 441 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 APMAPQ9HDC9 416 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 PSMC3IPQ9P2W1 217 aaPredicted RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 PILRAQ9UKJ1 303 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 RNF112Q9ULX5 631 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 CHD8Q9HCK8 2581 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 A0A096LPK6 155 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 OR2A25A4D2G3 310 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
LIMS3-205ENST00000487150 TXNDC9O14530 226 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ZSCAN9O15535 394 aaPredicted RBP14.07□□□□□ -0.16
LIMS3-205ENST00000487150 OR2B3O76000 313 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 KIAA0754O94854 1291 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 GUCA1CO95843 209 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 KLK3P07288 261 aaPredicted RBP14.07□□□□□ -0.16
LIMS3-205ENST00000487150 FAM153BP0C7A2 387 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 CCNYL3P0C7X3 344 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 COL6A2P12110 1019 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 CD1DP15813 335 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 PSMB5P28074 263 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 TMPRSS3P57727 454 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ABHD18Q0P651 414 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 CLN3Q13286 438 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 NAE1Q13564 534 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 SLC29A2Q14542 456 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 TGFBIQ15582 683 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 GPR19Q15760 415 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 TSNAXIP1Q2TAA8 658 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 FAM153CQ494X1 144 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 MANEAQ5SRI9 462 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 KIAA1614Q5VZ46 1190 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 SUSD1Q6UWL2 747 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 LCTLQ6UWM7 567 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 RNF44Q7L0R7 432 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 CMC1Q7Z7K0 106 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 SPACA3Q8IXA5 215 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 GSPT2Q8IYD1 628 aaKnown RBP14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ZSCAN1Q8NBB4 408 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 OR56A3Q8NH54 315 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 PROKR1Q8TCW9 393 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ANKRD49Q8WVL7 239 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 UBLCP1Q8WVY7 318 aaPredicted RBP14.07□□□□□ -0.16
LIMS3-205ENST00000487150 CCNL2Q96S94 520 aaPredicted RBP14.07□□□□□ -0.16
LIMS3-205ENST00000487150 NRTNQ99748 197 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ZFYVE21Q9BQ24 234 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 DPH7Q9BTV6 452 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ACAT2Q9BWD1 397 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 CAPS2Q9BXY5 557 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 KLHL25Q9H0H3 589 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 ENAMQ9NRM1 1142 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 EURLQ9NYK6 297 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 APC2O95996 2303 aa14.07□□□□□ -0.16
LIMS3-205ENST00000487150 IGF2RP11717 2491 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ASPMQ8IZT6 3477 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ACACAQ13085 2346 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 KRT87PA6NCN2 255 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 CDC7O00311 574 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 KERAO60938 352 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 C2P06681 752 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ARSFP54793 590 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 TLE3Q04726 772 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 BMPR2Q13873 1038 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 GRM7Q14831 915 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ACAP2Q15057 778 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 RASA2Q15283 850 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ZIC1Q15915 447 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 SULT1C3Q6IMI6 304 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 PWWP2BQ6NUJ5 590 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ADCK2Q7Z695 626 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ZFAND4Q86XD8 727 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 MCATQ8IVS2 390 aaKnown RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 LRRC56Q8IYG6 542 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 DNAJC22Q8N4W6 341 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 TTC29Q8NA56 475 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 PPFIBP2Q8ND30 876 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 RHEBL1Q8TAI7 183 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 UHMK1Q8TAS1 419 aaKnown RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 DCAKDQ8WVC6 231 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 PMEPA1Q969W9 287 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 RERGQ96A58 199 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 THAP11Q96EK4 314 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 NAF1Q96HR8 494 aaKnown RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 SELENOSQ9BQE4 189 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 NDC1Q9BTX1 674 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 DHRS4Q9BTZ2 278 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 NLNQ9BYT8 704 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
LIMS3-205ENST00000487150 TMEM184CQ9NVA4 438 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 WWOXQ9NZC7 414 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 NUDT4Q9NZJ9 180 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 PADI1Q9ULC6 663 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 TMCO1Q9UM00 188 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 DYRK1BQ9Y463 629 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 KCNE2Q9Y6J6 123 aa14.06□□□□□ -0.16
LIMS3-205ENST00000487150 C21orf140B9A014 251 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms