RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CABYRO75952 493 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 TMEM63AO94886 807 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 OTCP00480 354 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 FABP1P07148 127 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 OR4E1P0C645 316 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ZCCHC18P0CG32 403 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 FDPSP14324 419 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 CBR1P16152 277 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CPN2P22792 545 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 EEF1DP29692 281 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 ARL1P40616 181 aaPredicted RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 GRK6P43250 576 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 YAP1P46937 504 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 ENTPD1P49961 510 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 MEOX2P50222 304 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SERPINB9P50453 376 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CASP9P55211 416 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SUMO2P61956 95 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 AP1S1P61966 158 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 LIPEQ05469 1076 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 TFCP2Q12800 502 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CDK10Q15131 360 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CCDC6Q16204 474 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SLC35G1Q2M3R5 365 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ZNF674Q2M3X9 581 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 TMEM44Q2T9K0 475 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 PDSS1Q5T2R2 415 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 UBAP2Q5T6F2 1119 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 RIPPLY2Q5TAB7 128 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ATF7IP2Q5U623 682 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ARHGEF16Q5VV41 709 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 RAP1GAP2Q684P5 730 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SULT1C3Q6IMI6 304 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 GRHL2Q6ISB3 625 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 NANOGP8Q6NSW7 305 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 NFRKBQ6P4R8 1299 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 RFX8Q6ZV50 586 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 HAUS6Q7Z4H7 955 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CAMKMTQ7Z624 323 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SATL1Q86VE3 508 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ZFAND4Q86XD8 727 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 RFX6Q8HWS3 928 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 DHX40Q8IX18 779 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 OR8H3Q8N146 312 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 PDIK1LQ8N165 341 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SRBD1Q8N5C6 995 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 OR2C3Q8N628 320 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 UBL4BQ8N7F7 174 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SNX31Q8N9S9 440 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 TTC29Q8NA56 475 aaPredicted RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 SPATA4Q8NEY3 305 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SUN3Q8TAQ9 357 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 LRRC20Q8TCA0 184 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 IP6K1Q92551 441 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 UFD1Q92890 307 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 PTP4A1Q93096 173 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CPNE4Q96A23 557 aaPredicted RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 NXPE2Q96DL1 559 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 C9orf72Q96LT7 481 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CCNL2Q96S94 520 aaPredicted RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 RBM4BQ9BQ04 359 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 RBM4Q9BWF3 364 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 USP44Q9H0E7 712 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 SLC25A32Q9H2D1 315 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 PPA2Q9H2U2 334 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ARMC7Q9H6L4 198 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 LRRC40Q9H9A6 602 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 EPB41L5Q9HCM4 733 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 IL26Q9NPH9 171 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 PRDM8Q9NQV8 689 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 VPS45Q9NRW7 570 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 GIMAP4Q9NUV9 329 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ELOVL2Q9NXB9 296 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 KCND2Q9NZV8 630 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 EIF3KQ9UBQ5 218 aaKnown RBP5.31□□□□□ -1.56
COPS3-209ENST00000486810 MAN2B2Q9Y2E5 1009 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 CRYL1Q9Y2S2 319 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 KDM5DQ9BY66 1539 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 E9PCH4 1651 aa5.31□□□□□ -1.56
COPS3-209ENST00000486810 ZNF532Q9HCE3 1301 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 LOC100506127A0A0U1RQW1 187 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 PRR23AA6NEV1 266 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 A8MUI8 341 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 MEI4A8MW99 385 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 DNALI1O14645 258 aaPredicted RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 TNPO2O14787 897 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 CA12O43570 354 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CCNT2O60583 730 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 CST8O60676 142 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 TADA2AO75478 443 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 GPX5O75715 221 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 AFPP02771 609 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 CELA2AP08217 269 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 SNRNP70P08621 437 aaKnown RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 STSP08842 583 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 GNAO1P09471 354 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 CDH2P19022 906 aaPredicted RBP5.3□□□□□ -1.56
COPS3-209ENST00000486810 ABCB4P21439 1286 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 GIFP27352 417 aa5.3□□□□□ -1.56
COPS3-209ENST00000486810 RBL1P28749 1068 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms