RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 EPORP19235 508 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CMPK1P30085 196 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CSF2RBP32927 897 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CDH13P55290 713 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 GFERP55789 205 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 ABATP80404 500 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CLCQ05315 142 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 ILKQ13418 452 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 FRMD7Q6ZUT3 714 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 C17orf64Q86WR6 236 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 PLXDC1Q8IUK5 500 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 TRIM42Q8IWZ5 723 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 FAM20CQ8IXL6 584 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 OR2L3Q8NG85 312 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CNDP1Q96KN2 507 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 TGM7Q96PF1 710 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CAPS2Q9BXY5 557 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 ZBTB26Q9HCK0 441 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 ATXN7L1Q9ULK2 861 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-207ENST00000485465 SH2B3Q9UQQ2 575 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 NTN3O00634 580 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 CLGNO14967 610 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 NPHS1O60500 1241 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 KATNA1O75449 491 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 FKBP9O95302 570 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 CPNE6O95741 557 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 C9P02748 559 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 TSPAN8P19075 237 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 GNAZP19086 355 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 CSRP1P21291 193 aaKnown RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 GRK2P25098 689 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 YBX1P67809 324 aaKnown RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 CLPPQ16740 277 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 KIAA1614Q5VZ46 1190 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 CES4AQ5XG92 561 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 TRIM73Q86UV7 250 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 RAB3IL1Q8TBN0 382 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 TRPC4APQ8TEL6 797 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 SLC5A11Q8WWX8 675 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 NEIL2Q969S2 332 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 CD180Q99467 661 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 DPYSL5Q9BPU6 564 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 NUDT22Q9BRQ3 303 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 SYNDIG1Q9H7V2 258 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 NOL11Q9H8H0 719 aaKnown RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 IPPKQ9H8X2 491 aa16.93■□□□□ 0.3
CHMP3-207ENST00000485465 MRPS30Q9NP92 439 aaKnown RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 SEMA4BQ9NPR2 832 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 MN1Q10571 1320 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-207ENST00000485465 ZNF292O60281 2723 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 A0A0J9YY10 115 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 E7EQ34 232 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 OR7A17O14581 309 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 SLC30A4O14863 429 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 RFPL3O75679 317 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 MLYCDO95822 493 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 CDH1P12830 882 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 HOXB3P14651 431 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-207ENST00000485465 SERPINB5P36952 375 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 CCR10P46092 362 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 LSSP48449 732 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 E2F1Q01094 437 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 PCDH1Q08174 1060 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 LCP2Q13094 533 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 STX3Q13277 289 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 RCN2Q14257 317 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 RBBP7Q16576 425 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 TMEM71Q6P5X7 295 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 NXPE4Q6UWF7 544 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 SLCO4C1Q6ZQN7 724 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 FAM92BQ6ZTR7 304 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 WDR48Q8TAF3 677 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 CKAP2Q8WWK9 683 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 ZNF75CPQ92670 426 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-207ENST00000485465 ATP6V1E2Q96A05 226 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 PPM1MQ96MI6 270 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 GFM1Q96RP9 751 aaKnown RBP16.92■□□□□ 0.3
CHMP3-207ENST00000485465 TRMOQ9BU70 441 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 DRC3Q9H069 523 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 SEMA6CQ9H3T2 930 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 MANSC1Q9H8J5 431 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 SLC6A20Q9NP91 592 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 C1GALT1Q9NS00 363 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 CUEDC1Q9NWM3 386 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-207ENST00000485465 TOR4AQ9NXH8 423 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 TMEM9Q9P0T7 183 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 PCDHGA1Q9Y5H4 931 aa16.92■□□□□ 0.3
CHMP3-207ENST00000485465 IGKV1-8A0A0C4DH67 115 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 TLCD2A6NGC4 264 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 TMEM114B3SHH9 223 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 PPP6CO00743 305 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 KIF1CO43896 1103 aaKnown RBP16.91■□□□□ 0.3
CHMP3-207ENST00000485465 PRAMEF4O60810 478 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 CDH3P22223 829 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 HRH2P25021 359 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 GRIA3P42263 894 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 CCNG1P51959 295 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 CCDC157Q569K6 752 aa16.91■□□□□ 0.3
CHMP3-207ENST00000485465 CATSPEREQ5SY80 951 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms