RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CDH1P12830 882 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 EPHA3P29320 983 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 HSD17B2P37059 387 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 FASLGP48023 281 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 ARFIP2P53365 341 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 INHBCP55103 352 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 PPP1CAP62136 330 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 MEF2AQ02078 507 aaPredicted RBP14.03□□□□□ -0.16
LRIF1-202ENST00000485275 PLCL1Q15111 1095 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 CPSF6Q16630 551 aaKnown RBP eCLIP14.03□□□□□ -0.16
LRIF1-202ENST00000485275 GGTA1PQ4G0N0 100 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 OGFOD3Q6PK18 319 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 TMEM26Q6ZUK4 368 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 MYLK4Q86YV6 388 aaPredicted RBP14.03□□□□□ -0.16
LRIF1-202ENST00000485275 RNF175Q8N4F7 328 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 OR2T11Q8NH01 316 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 SLC5A11Q8WWX8 675 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 MAELQ96JY0 434 aaKnown RBP14.03□□□□□ -0.16
LRIF1-202ENST00000485275 RAB11FIP5Q9BXF6 653 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 ARRDC1-AS1Q9H2J1 176 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 GAREM1Q9H706 876 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 MEAF6Q9HAF1 191 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 GPRC5BQ9NZH0 403 aa14.03□□□□□ -0.16
LRIF1-202ENST00000485275 ATP6AP2A0A1C7CYW4 349 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 HGSO14964 777 aaPredicted RBP14.02□□□□□ -0.16
LRIF1-202ENST00000485275 CASC3O15234 703 aaKnown RBP14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ATP6AP2O75787 350 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 HGFP14210 728 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 CCND1P24385 295 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 SHMT2P34897 504 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ARRB1P49407 418 aaPredicted RBP14.02□□□□□ -0.16
LRIF1-202ENST00000485275 IRF8Q02556 426 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 TCF15Q12870 199 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ABRAXAS2Q15018 415 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 XKR7Q5GH72 579 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 XKR6Q5GH73 641 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 C6orf132Q5T0Z8 1188 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 THEMIS2Q5TEJ8 643 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ZC3H14Q6PJT7 736 aaKnown RBP14.02□□□□□ -0.16
LRIF1-202ENST00000485275 SLC9B2Q86UD5 537 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 SLC35F3Q8IY50 421 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 CACNA2D3Q8IZS8 1091 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 CCDC197Q8NCU1 140 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ZNF740Q8NDX6 193 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 PRSS33Q8NF86 280 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 METTL6Q8TCB7 284 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 RSC1A1Q92681 617 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 C19orf60Q96EN9 201 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 WDR34Q96EX3 536 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 MIPEPQ99797 713 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 SLC6A20Q9NP91 592 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 OR6C2Q9NZP2 312 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 SLC6A14Q9UN76 642 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 STK38LQ9Y2H1 464 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ARL2BPQ9Y2Y0 163 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 KCNE2Q9Y6J6 123 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 CSNK1G3Q9Y6M4 447 aa14.02□□□□□ -0.16
LRIF1-202ENST00000485275 ENO1P06733 434 aaKnown RBP14.01□□□□□ -0.17
LRIF1-202ENST00000485275 LINC00032P0C843 101 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 SLC2A4P14672 509 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 JUPP14923 745 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 GNAZP19086 355 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 HK2P52789 917 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 ZRSR2Q15696 482 aaKnown RBP14.01□□□□□ -0.17
LRIF1-202ENST00000485275 C14orf28Q4W4Y0 310 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 ICE2Q659A1 982 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 ZNF438Q7Z4V0 828 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 SDR16C5Q8N3Y7 309 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 CEP76Q8TAP6 659 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 USP7Q93009 1102 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 PPM1MQ96MI6 270 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 SIKE1Q9BRV8 207 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 LRFN3Q9BTN0 628 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 NUSAP1Q9BXS6 441 aaKnown RBP14.01□□□□□ -0.17
LRIF1-202ENST00000485275 SRMSQ9H3Y6 488 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 SYNPO2LQ9H987 977 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 EVA1BQ9NVM1 165 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 GEMIN8Q9NWZ8 242 aaKnown RBP14.01□□□□□ -0.17
LRIF1-202ENST00000485275 VTI1BQ9UEU0 232 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 ZNF839A8K0R7 811 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 SLCO1B7G3V0H7 640 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 TRIM38O00635 465 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 ARHGAP33O14559 1287 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 GIPC1O14908 333 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 UGDHO60701 494 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 CRCPO75575 148 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
LRIF1-202ENST00000485275 CASP2P42575 452 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 NEK2P51955 445 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 NUBP1P53384 320 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 TBCCQ15814 346 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 LSM12Q3MHD2 195 aaKnown RBP14.01□□□□□ -0.17
LRIF1-202ENST00000485275 PLA2G2CQ5R387 149 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 TMEM198Q66K66 360 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 ATG9BQ674R7 924 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 GRHL2Q6ISB3 625 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 TRIM73Q86UV7 250 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 FAM129CQ86XR2 697 aa14.01□□□□□ -0.17
LRIF1-202ENST00000485275 RAB42Q8N4Z0 105 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms