RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CDC7O00311 574 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 TERTO14746 1132 aaKnown RBP15.26■□□□□ 0.03
UPF3A-208ENST00000484246 HCRTR1O43613 425 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 SCRG1O75711 98 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 SLC35E2BP0CK96 405 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 HRH2P25021 359 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 RORAP35398 523 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 MAGEA12P43365 314 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 SERPINB9P50453 376 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 CDKL4Q5MAI5 379 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 MANEAQ5SRI9 462 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 PRAMEF13Q5VWM6 474 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 TLDC1Q6P9B6 456 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 SUSD1Q6UWL2 747 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 C6orf15Q6UXA7 325 aaPredicted RBP15.26■□□□□ 0.03
UPF3A-208ENST00000484246 KLHDC8AQ8IYD2 350 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 DHRS4Q9BTZ2 278 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 PRORYQ9H606 182 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 ARL15Q9NXU5 204 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 EURLQ9NYK6 297 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 FETUBQ9UGM5 382 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 TAC3Q9UHF0 121 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 AP1M2Q9Y6Q5 423 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 NPEPPSL1A6NEC2 478 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 E7EQ34 232 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 K7ENP7 123 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 ZSCAN9O15535 394 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 RIPK2O43353 540 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 HBQ1P09105 142 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 FAM153BP0C7A2 387 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 MYBL2P10244 700 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 CD1DP15813 335 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 CNTFP26441 200 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 HNMTP50135 292 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 PMS2P54278 862 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 TSNQ15631 228 aaKnown RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 ZXDCQ2QGD7 858 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 FAM153CQ494X1 144 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 INO80CQ6PI98 192 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 LCTLQ6UWM7 567 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 MBOAT1Q6ZNC8 495 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 PAQR7Q86WK9 346 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 TMEM126BQ8IUX1 230 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 MCATQ8IVS2 390 aaKnown RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 GPR135Q8IZ08 494 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 IL22RA1Q8N6P7 574 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 GALNT6Q8NCL4 622 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 PPFIBP2Q8ND30 876 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 PAFAH2Q99487 392 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 EFHD1Q9BUP0 239 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 EPB41L4BQ9H329 900 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 ANKZF1Q9H8Y5 726 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 MRPS30Q9NP92 439 aaKnown RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 UTP6Q9NYH9 597 aaKnown RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 CTNNAL1Q9UBT7 734 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 METRNQ9UJH8 293 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 SRPK3Q9UPE1 567 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 KLHL20Q9Y2M5 609 aa15.25■□□□□ 0.03
UPF3A-208ENST00000484246 URB1O60287 2271 aaKnown RBP15.25■□□□□ 0.03
UPF3A-208ENST00000484246 A0A087X1B8 175 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 FITM1A5D6W6 292 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 ZZEF1O43149 2961 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 EFSO43281 561 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 SRPX2O60687 465 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 CTSVO60911 334 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 OR2B3O76000 313 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 SLU7O95391 586 aaKnown RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 INHBAP08476 426 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 CCDC166P0CW27 439 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 EZRP15311 586 aaKnown RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 SERPINB8P50452 374 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 VAC14Q08AM6 782 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 COL28A1Q2UY09 1125 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 DEFB110Q30KQ9 67 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 CRTC2Q53ET0 693 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 TCTE1Q5JU00 501 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 ZNF385CQ66K41 422 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 CAPN13Q6MZZ7 669 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 RHBDD2Q6NTF9 364 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 TAOK1Q7L7X3 1001 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 CMC1Q7Z7K0 106 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 PROKR1Q8TCW9 393 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 HNRNPLLQ8WVV9 542 aaKnown RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 N4BP2L2Q92802 583 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 KIAA1191Q96A73 305 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 ZFYVE21Q9BQ24 234 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 DPH2Q9BQC3 489 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 HAUS8Q9BT25 410 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 DPH7Q9BTV6 452 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 ACAT2Q9BWD1 397 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 ACTR5Q9H9F9 607 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-208ENST00000484246 LHX9Q9NQ69 397 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 PCMTD2Q9NV79 361 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 PADI1Q9ULC6 663 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 PCDHGA6Q9Y5G7 932 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 SDK2Q58EX2 2172 aa15.24■□□□□ 0.03
UPF3A-208ENST00000484246 CELSR3Q9NYQ7 3312 aa15.23■□□□□ 0.03
UPF3A-208ENST00000484246 C21orf140B9A014 251 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms