RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SLC7A5P2Q9GIP4 190 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 PLAC1Q9HBJ0 212 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 GPR83Q9NYM4 423 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 IL1RAPL1Q9NZN1 696 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 TCFL5Q9UL49 500 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ICKQ9UPZ9 632 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 SPTBN1Q01082 2364 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 SPENQ96T58 3664 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 USP9XQ93008 2570 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 MEN1O00255 615 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 BTN3A3O00478 584 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 BTN3A1O00481 513 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SLC16A5O15375 505 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 CEACAM4O75871 244 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 C1orf105O95561 183 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 LDLRP01130 860 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 CATP04040 527 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 CHRM5P08912 532 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 POLR2CP19387 275 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 GABRB3P28472 473 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 PRDX3P30048 256 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 PKLRP30613 574 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 STX2P32856 288 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 MPP1Q00013 466 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ABRQ12979 859 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 PRKG2Q13237 762 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SP140Q13342 867 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 CUL1Q13616 776 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ELOAQ14241 798 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SLC5A12Q1EHB4 618 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 PLEKHN1Q494U1 663 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 CNSTQ6PJW8 725 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SPESP1Q6UW49 350 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ZDHHC24Q6UX98 284 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 NAPRTQ6XQN6 538 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 MED25Q71SY5 747 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 OR2L8Q8NGY9 312 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 CD200R1Q8TD46 325 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SKA2Q8WVK7 121 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ANKRD7Q92527 254 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SNRNP40Q96DI7 357 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 C5orf34Q96MH7 638 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 GPR21Q99679 349 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 MENTQ9BUN1 341 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 FANCEQ9HB96 536 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 POPDC3Q9HBV1 291 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SAYSD1Q9NPB0 183 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ZDHHC18Q9NUE0 388 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ASF1BQ9NVP2 202 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 ACTR10Q9NZ32 417 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 TRMT6Q9UJA5 497 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SLC39A10Q9ULF5 831 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SLC5A6Q9Y289 635 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 TDRKHQ9Y2W6 561 aaKnown RBP9.62□□□□□ -0.87
CPSF4-213ENST00000484112 MED16Q9Y2X0 877 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 VWA7Q9Y334 891 aa9.62□□□□□ -0.87
CPSF4-213ENST00000484112 SHANK1Q9Y566 2161 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 TCRBV9S1A1TA0A576 114 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 GSAPA4D1B5 854 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 SLC9B1P1A6NJY1 282 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 GFYI3L273 518 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 MYO1CO00159 1063 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ZBTB14O43829 449 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 CBX6O95503 412 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 C8GP07360 202 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 RAB40ALP0C0E4 278 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ERGP11308 486 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 CDH3P22223 829 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 FDXRP22570 491 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 OTX2P32243 289 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 MAGEA4P43358 317 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 KPNA2P52292 529 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 RRADP55042 308 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 CSE1LP55060 971 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 MRPS25P82663 173 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ATP1A4Q13733 1029 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 GRB7Q14451 532 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 FASTKD3Q14CZ7 662 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 CYP2A13Q16696 494 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 KLHL38Q2WGJ6 581 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 PTCHD3Q3KNS1 767 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ACSBG2Q5FVE4 666 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 HP1BP3Q5SSJ5 553 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 TRMT10BQ6PF06 316 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ZNF517Q6ZMY9 492 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 HPS6Q86YV9 775 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 DSELQ8IZU8 1212 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 IQCKQ8N0W5 287 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 TMEM102Q8N9M5 508 aaPredicted RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 EIF1ADQ8N9N8 165 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 CFAP61Q8NHU2 1237 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 ASB11Q8WXH4 323 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 PDLIM5Q96HC4 596 aaKnown RBP9.61□□□□□ -0.87
CPSF4-213ENST00000484112 VPS39Q96JC1 886 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 LRFN5Q96NI6 719 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 CPNE1Q99829 537 aa9.61□□□□□ -0.87
CPSF4-213ENST00000484112 NLNQ9BYT8 704 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms