RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TRIM68Q6AZZ1 485 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 GPR139Q6DWJ6 353 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 NCEH1Q6PIU2 408 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SLC39A5Q6ZMH5 540 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 TAS1R1Q7RTX1 841 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SPATA19Q7Z5L4 167 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 DHDDSQ86SQ9 333 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 KBTBD6Q86V97 674 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 DSELQ8IZU8 1212 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 OR8H3Q8N146 312 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 ELMOD1Q8N336 334 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 OR7D4Q8NG98 312 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 MAPK15Q8TD08 544 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 LPGAT1Q92604 370 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 PPP2R3CQ969Q6 453 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 ZNF689Q96CS4 500 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 EID2BQ96D98 161 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 TMA16Q96EY4 203 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 ZNF845Q96IR2 970 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 B3GALT6Q96L58 329 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 ZNF570Q96NI8 536 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 BTBD9Q96Q07 612 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 GCNAQ96QF7 691 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 NDNQ99608 321 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 HOPXQ9BPY8 73 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 GPR63Q9BZJ6 419 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 KLHL4Q9C0H6 718 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 GSTO2Q9H4Y5 243 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 ALG9Q9H6U8 611 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 MRPL17Q9NRX2 175 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 CPNE7Q9UBL6 633 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SCOCQ9UIL1 159 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 TRMT6Q9UJA5 497 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 APPL1Q9UKG1 709 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 SARDHQ9UL12 918 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 BLOC1S6Q9UL45 172 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 PSMD13Q9UNM6 376 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 YBX2Q9Y2T7 364 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 NDUFAF1Q9Y375 327 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 B3GALT1Q9Y5Z6 326 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 COPG1Q9Y678 874 aaKnown RBP7.55□□□□□ -1.2
SNX13-208ENST00000482558 ARL5AQ9Y689 179 aa7.55□□□□□ -1.2
SNX13-208ENST00000482558 C7orf72A4D263 438 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MAGEA13PA6NCF6 341 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 HMX3A6NHT5 357 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 FADS2P1A8MWK0 482 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 NT5C1B-RDH14C9J2C7 533 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 H0YJX3 145 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 SCDO00767 359 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 AIM2O14862 343 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 AZIN1O14977 448 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MUSKO15146 869 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 KLK8O60259 260 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 ZMPSTE24O75844 475 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 TMCC1O94876 653 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 GJB5O95377 273 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MATN4O95460 622 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 PLATP00750 562 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 NPPAP01160 153 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 HNRNPA1P09651 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
SNX13-208ENST00000482558 GFAPP14136 432 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 IDO1P14902 403 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 ZNF7P17097 686 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 DDX6P26196 483 aaKnown RBP eCLIP7.54□□□□□ -1.2
SNX13-208ENST00000482558 CDC25CP30307 473 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 HMGCLP35914 325 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 RGS4P49798 205 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 GATMP50440 423 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 HK3P52790 923 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 CDKN2DP55273 166 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 PKNOX1P55347 436 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 RHOAP61586 193 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 RPS24P62847 133 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 RPL11P62913 178 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 SLC7A9P82251 487 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 CHRNEQ04844 493 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 FOXM1Q08050 763 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MALLQ13021 153 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 CHAF1BQ13112 559 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 ADAM15Q13444 863 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 LSAMPQ13449 338 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 CDH18Q13634 790 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 GALNT3Q14435 633 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 RAB30Q15771 203 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MMEL1Q495T6 779 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 GPR33Q49SQ1 333 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MPPE1Q53F39 396 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 PIGGQ5H8A4 983 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 CDKL4Q5MAI5 379 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 SAMD4BQ5PRF9 694 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 RARS2Q5T160 578 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 ARMC12Q5T9G4 340 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 BORAQ6PGQ7 559 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms