RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PRSS55Q6UWB4 352 aaPredicted RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 TRIM48Q8IWZ4 208 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 NLGN4XQ8N0W4 816 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 WDR36Q8NI36 951 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 FKBP10Q96AY3 582 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 MALT1Q9UDY8 824 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SCML2Q9UQR0 700 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 KLHL20Q9Y2M5 609 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 WBP11Q9Y2W2 641 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 TLL1O43897 1013 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 IGLV3-25P01717 112 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 BMP1P13497 986 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TYMPP19971 482 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SLC6A4P31645 630 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 INPP1P49441 399 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 CLK3P49761 638 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 OR2B6P58173 313 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ABRQ12979 859 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 NPRL3Q12980 569 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SIX5Q8N196 739 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ZBTB2Q8N680 514 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 C7orf57Q8NEG2 295 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 OR5AK3PQ8NH89 298 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 NELL1Q92832 810 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 APIPQ96GX9 242 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SUSD3Q96L08 255 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TCF25Q9BQ70 676 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SNTG1Q9NSN8 517 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ZNF221Q9UK13 617 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 RPS6KA6Q9UK32 745 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 FBXO10Q9UK96 956 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ERVK-11Q9UQG0 969 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 PRSS21Q9Y6M0 314 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 CENPXA8MT69 81 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 MAGEB17A8MXT2 336 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CTDSP2O14595 271 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 GABARAPO95166 117 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 FCGRTP55899 365 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 MVKQ03426 396 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ELP6Q0PNE2 266 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CHIT1Q13231 466 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 SLC14A1Q13336 389 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 PLD1Q13393 1074 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 GRB14Q14449 540 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CHRNA6Q15825 494 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 XKR6Q5GH73 641 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 RBFAQ8N0V3 343 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 SLC34A3Q8N130 599 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CAMKK1Q8N5S9 505 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 DPP10Q8N608 796 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 RHOXF1Q8NHV9 184 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 DNASE1L2Q92874 299 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 PSKH2Q96QS6 385 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 FEVQ99581 238 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 TRIT1Q9H3H1 467 aaKnown RBP12.36□□□□□ -0.43
VPS52-218ENST00000482399 POPDC3Q9HBV1 291 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CCNB1IP1Q9NPC3 277 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 AKIP1Q9NQ31 210 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 SLC52A3Q9NQ40 469 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 HEBP1Q9NRV9 189 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ADPRHL2Q9NX46 363 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ELOVL2Q9NXB9 296 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 RAB23Q9ULC3 237 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 B3GNT3Q9Y2A9 372 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ERN1O75460 977 aaKnown RBP12.36□□□□□ -0.43
VPS52-218ENST00000482399 NPPAP01160 153 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 TRBC1P01850 177 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CKMT1AP12532 417 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 SPNP16150 400 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 GATMP50440 423 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CACNG1Q06432 222 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 BCL2L1Q07817 233 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 TSTQ16762 297 aaKnown RBP12.36□□□□□ -0.43
VPS52-218ENST00000482399 PTCHD3Q3KNS1 767 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 RUNDC3AQ59EK9 446 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 DEPDC1Q5TB30 811 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ITPKCQ96DU7 683 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 RDH12Q96NR8 316 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 GORASP2Q9H8Y8 452 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 C11orf16Q9NQ32 467 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 NECTIN3Q9NQS3 549 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 DNMT3LQ9UJW3 386 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ITGB1BP2Q9UKP3 347 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 DHRS7Q9Y394 339 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 SNX4O95219 450 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 APOL3O95236 402 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CELF2O95319 508 aaKnown RBP12.36□□□□□ -0.43
VPS52-218ENST00000482399 TSPAN12O95859 305 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 EPOP01588 193 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 HOXC13P31276 330 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 KDELR2P33947 212 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ST3GAL4Q11206 333 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms