RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 OR2A25A4D2G3 310 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 GOLGA8MH3BSY2 632 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 SLC16A5O15375 505 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 DNAJB5O75953 348 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 ANXA5P08758 320 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 HIST1H2AGP0C0S8 130 aaPredicted RBP10.96□□□□□ -0.65
CCM2-213ENST00000480658 HIST1H2ADP20671 130 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 GRK3P35626 688 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 SLC1A2P43004 574 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 PAFAH1B1P43034 410 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 GCGRP47871 477 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 PRDX1Q06830 199 aaKnown RBP10.96□□□□□ -0.65
CCM2-213ENST00000480658 CRYMQ14894 314 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 RNASEH2BQ5TBB1 312 aaKnown RBP10.96□□□□□ -0.65
CCM2-213ENST00000480658 ANKRD22Q5VYY1 191 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 ICE2Q659A1 982 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 FCRL6Q6DN72 434 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 NIPAL1Q6NVV3 410 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 CES3Q6UWW8 571 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 IQCKQ8N0W5 287 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 SLC35F6Q8N357 371 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 FAM26EQ8N5C1 309 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 TBC1D19Q8N5T2 526 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 BBOF1Q8ND07 529 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 FDCSPQ8NFU4 85 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 CPT1CQ8TCG5 803 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 MCOLN3Q8TDD5 553 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 ASB11Q8WXH4 323 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 MIB2Q96AX9 1013 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 MS4A14Q96JA4 679 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 HIST1H2AHQ96KK5 128 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 CCDC138Q96M89 665 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 IL17FQ96PD4 163 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 MIPEPQ99797 713 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 HIST1H2AJQ99878 128 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 H2AFJQ9BTM1 129 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 TRIM54Q9BYV2 358 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 ZNF304Q9HCX3 659 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 CCDC177Q9NQR7 707 aaPredicted RBP10.96□□□□□ -0.65
CCM2-213ENST00000480658 P4HTMQ9NXG6 502 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 CDC23Q9UJX2 597 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 FBXO5Q9UKT4 447 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 DHRS7Q9Y394 339 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 NFS1Q9Y697 457 aa10.96□□□□□ -0.65
CCM2-213ENST00000480658 ASH1LQ9NR48 2969 aaKnown RBP10.96□□□□□ -0.66
CCM2-213ENST00000480658 ARHGEF33A8MVX0 844 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 GFYI3L273 518 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 DNALI1O14645 258 aaPredicted RBP10.95□□□□□ -0.66
CCM2-213ENST00000480658 SLC16A8O95907 504 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 VSX2P58304 361 aaPredicted RBP10.95□□□□□ -0.66
CCM2-213ENST00000480658 FAM53BQ14153 422 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 RBBP7Q16576 425 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 TUBB8Q3ZCM7 444 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 WASHC2DQ5SRD0 308 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 THEMIS2Q5TEJ8 643 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 LCN10Q6JVE6 187 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 CNTN4Q8IWV2 1026 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 MYO1HQ8N1T3 1032 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 ZADH2Q8N4Q0 377 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 C2CD4AQ8NCU7 369 aaPredicted RBP10.95□□□□□ -0.66
CCM2-213ENST00000480658 ATL1Q8WXF7 558 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 COL26A1Q96A83 441 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 MIEF2Q96C03 454 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 RNF31Q96EP0 1072 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 CABS1Q96KC9 395 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 SIGLEC10Q96LC7 697 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 PLCD4Q9BRC7 762 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 AARSD1Q9BTE6 412 aaKnown RBP10.95□□□□□ -0.66
CCM2-213ENST00000480658 DPH7Q9BTV6 452 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 NSMCE4AQ9NXX6 385 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 B3GNT3Q9Y2A9 372 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 SAR1BQ9Y6B6 198 aa10.95□□□□□ -0.66
CCM2-213ENST00000480658 A0A1W2PPV9 198 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 ZNF185O15231 689 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 SORBS2O94875 1100 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 SYF2O95926 243 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 ENO2P09104 434 aaPredicted RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 MYBL2P10244 700 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 FBLP22087 321 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 CXCR2P25025 360 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 ITGA3P26006 1051 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 AVPR1BP47901 424 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 TERF1P54274 439 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 AP1S2P56377 157 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 RPS15AP62244 130 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 DR1Q01658 176 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 CHAF1BQ13112 559 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 CTBP1Q13363 440 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 DSG2Q14126 1118 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 FRG1Q14331 258 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 NKG7Q16617 165 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 HIF1AQ16665 826 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 HSP90AA5PQ58FG0 334 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 ACSBG2Q5FVE4 666 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.94□□□□□ -0.66
CCM2-213ENST00000480658 AGAP7PQ5VUJ5 663 aa10.94□□□□□ -0.66
CCM2-213ENST00000480658 PRAMEF13Q5VWM6 474 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms