RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 VAC14Q08AM6 782 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 MEP1AQ16819 746 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 POM121L1PQ3SYA9 428 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 OR4F3Q6IEY1 312 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 ST13P5Q8NFI4 369 aaPredicted RBP16.88■□□□□ 0.29
TNXB-204ENST00000479795 ZNF420Q8TAQ5 688 aaPredicted RBP16.88■□□□□ 0.29
TNXB-204ENST00000479795 FRS2Q8WU20 508 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 HCFC1R1Q9NWW0 138 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 PCDHGA8Q9Y5G5 932 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 OR2AG2A6NM03 316 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 NEDD8-MDP1E9PL57 170 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 HS6ST1O60243 411 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 LRG1P02750 347 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 DDX39BQ13838 428 aaKnown RBP16.88■□□□□ 0.29
TNXB-204ENST00000479795 ITCHQ96J02 903 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 CCDC138Q96M89 665 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 LYSMD1Q96S90 227 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 MBOAT4Q96T53 435 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 KLHL25Q9H0H3 589 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 FAM118AQ9NWS6 357 aa16.88■□□□□ 0.29
TNXB-204ENST00000479795 TRBV5-3A0A0A0MS03 114 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 MATN1P21941 496 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 OXA1LQ15070 435 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 CES5AQ6NT32 575 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 ZNF551Q7Z340 670 aaPredicted RBP16.87■□□□□ 0.29
TNXB-204ENST00000479795 R3HCC1LQ7Z5L2 792 aaKnown RBP16.87■□□□□ 0.29
TNXB-204ENST00000479795 BTLAQ7Z6A9 289 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
TNXB-204ENST00000479795 TMC8Q8IU68 726 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 CPXM2Q8N436 756 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 AADATQ8N5Z0 425 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 LEMD2Q8NC56 503 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 ASB11Q8WXH4 323 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 ECHDC3Q96DC8 303 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 SH3GL1Q99961 368 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 SLC12A9Q9BXP2 914 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 SLC29A3Q9BZD2 475 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 SPINT3P49223 89 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 CLDN8P56748 225 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 NFATC3Q12968 1075 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 KCNAB2Q13303 367 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 DOK6Q6PKX4 331 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 THAP5Q7Z6K1 395 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 SORCS1Q8WY21 1168 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 CTRCQ99895 268 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 CPPED1Q9BRF8 314 aaPredicted RBP16.87■□□□□ 0.29
TNXB-204ENST00000479795 RNF208Q9H0X6 261 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 DCAF13Q9NV06 445 aaKnown RBP16.87■□□□□ 0.29
TNXB-204ENST00000479795 SNX6Q9UNH7 406 aa16.87■□□□□ 0.29
TNXB-204ENST00000479795 TMA7Q9Y2S6 64 aaKnown RBP16.87■□□□□ 0.29
TNXB-204ENST00000479795 PLXNB3Q9ULL4 1909 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 PABPN1LA6NDY0 278 aaKnown RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 TMEM202A6NGA9 273 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 KPNA4O00629 521 aaPredicted RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 CCL16O15467 120 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CBSLP0DN79 551 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 ATP1B2P14415 290 aaPredicted RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 PFKLP17858 780 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 AGXTP21549 392 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 NR4A1P22736 598 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CBSP35520 551 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CCR2P41597 374 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 MLLT10P55197 1068 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CNKSR3Q6P9H4 555 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 SLC39A5Q6ZMH5 540 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 RBM23Q86U06 439 aaKnown RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 C8orf59Q8N0T1 100 aaPredicted RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 EFHD2Q96C19 240 aaPredicted RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 ZNF689Q96CS4 500 aaPredicted RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 OSBPL10Q9BXB5 764 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 MTG2Q9H4K7 406 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 ATP11BQ9Y2G3 1177 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 SCELO95171 688 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 ZNF682O95780 498 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 SLC7A9P82251 487 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CHIT1Q13231 466 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CARD16Q5EG05 197 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 PERM1Q5SV97 790 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 MPP7Q5T2T1 576 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 GPR149Q86SP6 731 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 CHCHD4Q8N4Q1 142 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 BPIFB6Q8NFQ5 453 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 OR7A2PQ8NGA2 310 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 PNPT1Q8TCS8 783 aaKnown RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 ELMO1Q92556 727 aa16.86■□□□□ 0.29
TNXB-204ENST00000479795 MTERF1Q99551 399 aaKnown RBP16.86■□□□□ 0.29
TNXB-204ENST00000479795 KCNE1BA0A087WTH5 132 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 RFXANKO14593 260 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 C8AP07357 584 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 PPP2R2BQ00005 443 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 IL1RL1Q01638 556 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 ABRQ12979 859 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 SMU1Q2TAY7 513 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 CTU2Q2VPK5 515 aaKnown RBP16.85■□□□□ 0.29
TNXB-204ENST00000479795 LDLRAP1Q5SW96 308 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 Q6ZVL8 140 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 CYP2U1Q7Z449 544 aa16.85■□□□□ 0.29
TNXB-204ENST00000479795 GALNT5Q7Z7M9 940 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms