RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CARSP49589 748 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ARHGAP8P85298 464 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 MGAT5Q09328 741 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SLC14A1Q13336 389 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 NAB1Q13506 487 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 FRG1Q14331 258 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SF3A2Q15428 464 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 GSTA3Q16772 222 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ALG11Q2TAA5 492 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SPDYAQ5MJ70 313 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 STEAP4Q687X5 459 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF470Q6ECI4 717 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PTRHD1Q6GMV3 140 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TCEAL6Q6IPX3 200 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 NEPROQ6NW34 567 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 IRGCQ6NXR0 463 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM220Q6QAJ8 160 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZDHHC24Q6UX98 284 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PACS1Q6VY07 963 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 KIAA0408Q6ZU52 694 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 C3orf62Q6ZUJ4 267 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ASCL5Q7RTU5 278 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 OVCH1Q7RTY7 1134 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TAF8Q7Z7C8 310 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ADGRG6Q86SQ4 1221 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 CROCCP2Q86T23 111 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 KIF18BQ86Y91 864 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SLC22A18ASQ8N1D0 253 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PELI3Q8N2H9 469 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 GPR150Q8NGU9 434 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 LMX1AQ8TE12 382 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TCEAL3Q969E4 200 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TSACCQ96A04 125 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PDXPQ96GD0 296 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PWWP2AQ96N64 755 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PANX3Q96QZ0 392 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 JAM3Q9BX67 310 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 FGF22Q9HCT0 170 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TM7SF3Q9NS93 570 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 IARS2Q9NSE4 1012 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZDHHC18Q9NUE0 388 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TRNAU1APQ9NX07 287 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 IL1RAPL1Q9NZN1 696 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 NDUFA13Q9P0J0 144 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PDP2Q9P2J9 529 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 CNOT6Q9ULM6 557 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 CBLCQ9ULV8 474 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 GPR34Q9UPC5 381 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PCDHB1Q9Y5F3 818 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PCDHGB2Q9Y5G2 931 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 COMMD10Q9Y6G5 202 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SLCO1B1Q9Y6L6 691 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 CSNK1G3Q9Y6M4 447 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 DGKBQ9Y6T7 804 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 COMMD3-BMI1R4GMX3 469 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 PCDH15Q96QU1 1955 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 LRP4O75096 1905 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZCWPW2A0A1B0GU75 182 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 OR2AG2A6NM03 316 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 E5RI56 91 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 GOLGA8TH3BQL2 631 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 H7BY64 318 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PRMT5O14744 637 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 GSTA4O15217 222 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 TP73O15350 636 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 FLRT2O43155 660 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 GPR39O43194 453 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 ZW10O43264 779 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PCDHGA12O60330 932 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 ATP6V1G1O75348 118 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 MTX2O75431 263 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PIAS2O75928 621 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 ERVK-10P10266 1014 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 ATP6V1C1P21283 382 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 EPHA8P29322 1005 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PBLDP30039 288 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 ID4P47928 161 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 ARCN1P48444 511 aaKnown RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 POLD2P49005 469 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PRLHRP49683 370 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 MECP2P51608 486 aaKnown RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PMS2P54278 862 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 EIF3BP55884 814 aaKnown RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 IL2P60568 153 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 IL9RQ01113 521 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PLOD1Q02809 727 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 KLC1Q07866 573 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 EIF2B5Q13144 721 aaKnown RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 KRT72Q14CN4 511 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 FASTKD3Q14CZ7 662 aaKnown RBP6.04□□□□□ -1.44
SF3B1-209ENST00000479532 TMED2Q15363 201 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 TRADDQ15628 312 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 TYSND1Q2T9J0 566 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 KLHL38Q2WGJ6 581 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 UAP1L1Q3KQV9 507 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 BCL7AQ4VC05 210 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 SYTL3Q4VX76 610 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 PYCR3Q53H96 274 aa6.04□□□□□ -1.44
SF3B1-209ENST00000479532 HSP90AA5PQ58FG0 334 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms