RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CYP2A13Q16696 494 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 AAK1Q2M2I8 961 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ZNF648Q5T619 568 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 LCN8Q6JVE9 175 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SCIMPQ6UWF3 145 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 MBOAT1Q6ZNC8 495 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SLCO4C1Q6ZQN7 724 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 EP400NLQ6ZTU2 488 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 RETREG3Q86VR2 466 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 TRIM69Q86WT6 500 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PTRH1Q86Y79 214 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 SFTPA1Q8IWL2 248 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SLC15A3Q8IY34 581 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 LAS2Q8IYD9 372 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SYNPOQ8N3V7 929 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 NATD1Q8N6N6 113 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 DCBLD1Q8N8Z6 715 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 IL17RCQ8NAC3 791 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ADCY4Q8NFM4 1077 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 OR2T34Q8NGX1 318 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 OR5K2Q8NHB8 316 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 WDR20Q8TBZ3 569 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ZNF480Q8WV37 535 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SMPDL3AQ92484 453 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 TFGQ92734 400 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 SIPA1Q96FS4 1042 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 MED8Q96G25 268 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SCARF2Q96GP6 870 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 NAF1Q96HR8 494 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 ITCHQ96J02 903 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 UHRF1Q96T88 793 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 PRPF18Q99633 342 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 ZNF184Q99676 751 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 RPP25Q9BUL9 199 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 C1orf50Q9BV19 199 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ZDHHC5Q9C0B5 715 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ATG10Q9H0Y0 220 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 TRIT1Q9H3H1 467 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 MVB12BQ9H7P6 319 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 NT5DC2Q9H857 520 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PELI2Q9HAT8 420 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SGK2Q9HBY8 427 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 BATF3Q9NR55 127 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 INTS7Q9NVH2 962 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 AHSPQ9NZD4 102 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 GULP1Q9UBP9 304 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ZNHIT2Q9UHR6 403 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 CNOT11Q9UKZ1 510 aaKnown RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 ASF1AQ9Y294 204 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 MAN2B2Q9Y2E5 1009 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 LRCH1Q9Y2L9 728 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 POLR3HQ9Y535 204 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 PCDHA9Q9Y5H5 950 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PIAS3Q9Y6X2 628 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 LAMA2P24043 3122 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 A0A1W2PQF6 199 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 A0A1W2PQU0 124 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 TCRBV3S1A0A5B6 114 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 LRRC72A6NJI9 287 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 TNFRSF10CO14798 259 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 RNGTTO60942 597 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 KLF8O95600 359 aaPredicted RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 CAPNS1P04632 268 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 PGRP06401 933 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 NPPBP16860 134 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 AMD1P17707 334 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 IL10P22301 178 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 IDSP22304 550 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 HRH2P25021 359 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 HTR1BP28222 390 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 PDHA2P29803 388 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 PBLDP30039 288 aaPredicted RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 S100A3P33764 101 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 DPP6P42658 865 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 BDKRB1P46663 353 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ZFP36L2P47974 494 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 TRPC1P48995 793 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 TBPL1P62380 186 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 YPEL5P62699 121 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 HMGCS1Q01581 520 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 TAP2Q03519 686 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ACSM2AQ08AH3 577 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 MAPKAPK3Q16644 382 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ZXDCQ2QGD7 858 aaPredicted RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 TIGD2Q4W5G0 525 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 C2orf27AQ580R0 203 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 SGO1Q5FBB7 561 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ACSM2BQ68CK6 577 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 NAIF1Q69YI7 327 aaPredicted RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 CAPRIN2Q6IMN6 1127 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 GALNT18Q6P9A2 607 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 CRTC3Q6UUV7 619 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 NXPE4Q6UWF7 544 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 WASH2PQ6VEQ5 465 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 R3HCC1LQ7Z5L2 792 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 CAMKMTQ7Z624 323 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 SPATA24Q86W54 205 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 LRRC56Q8IYG6 542 aaPredicted RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 LIX1Q8N485 282 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms