RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	BFAR	Q9NZS9	450 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	DUX4	Q9UBX2	424 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	KIF25	Q9UIL4	384 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	FEM1B	Q9UK73	627 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	ELF5	Q9UKW6	265 aa	Predicted RBP	4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PPT2	Q9UMR5	302 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PCDHB10	Q9UN67	800 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	ING4	Q9UNL4	249 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	AGTPBP1	Q9UPW5	1226 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	KLHL20	Q9Y2M5	609 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC45A1	Q9Y2W3	748 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	ORC6	Q9Y5N6	252 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	TNFRSF18	Q9Y5U5	241 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PTPRJ	Q12913	1337 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	NRCAM	Q92823	1304 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	PHIP	Q8WWQ0	1821 aa		4.6	□□□□□ -1.67
PTCD3-212	ENST00000477520	CCDC195	A0A1B0GUA6	201 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	BCLAF3	A2AJT9	711 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CCDC78	A2IDD5	438 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520		A6NL46	340 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520		A8MU76	341 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	EFCAB9	A8MZ26	197 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520		F8W036	122 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520		I3L521	148 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	WRB	O00258	174 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CYB561D2	O14569	222 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	EI24	O14681	340 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	MRAS	O14807	208 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC37A4	O43826	429 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ACSL4	O60488	711 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	VPS4B	O75351	444 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CSPG5	O95196	566 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CNOT4	O95628	575 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	PRKCB	P05771	671 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	GNAO1	P09471	354 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ZSCAN5DP	P0CG00	497 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SFTPC	P11686	197 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CKMT1A	P12532	417 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ICAM2	P13598	275 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	HLA-E	P13747	358 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	NCF1	P14598	390 aa	Predicted RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ALOX12	P18054	663 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	TNNI3	P19429	210 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	HTR1E	P28566	365 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ADORA2A	P29274	412 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	UQCRC1	P31930	480 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	TM4SF4	P48230	202 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ARSF	P54793	590 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	DNAJB13	P59910	316 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	NANOS3	P60323	173 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SNAP25	P60880	206 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	YWHAZ	P63104	245 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	RACK1	P63244	317 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	UBXN2A	P68543	259 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	RPP38	P78345	283 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	DGCR2	P98153	550 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ROR1	Q01973	937 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ABHD18	Q0P651	414 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SP140	Q13342	867 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ASAH1	Q13510	395 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SEMA5A	Q13591	1074 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	MAPK11	Q15759	364 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	BAK1	Q16611	211 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	UBE2S	Q16763	222 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	BTBD16	Q32M84	506 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ADPRM	Q3LIE5	342 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC9B1	Q4ZJI4	515 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	C4orf46	Q504U0	113 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	TEX30	Q5JUR7	227 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	GLRA4	Q5JXX5	417 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SLC35F1	Q5T1Q4	408 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ATF7IP2	Q5U623	682 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	METTL11B	Q5VVY1	283 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SDE2	Q6IQ49	451 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	TCTN3	Q6NUS6	607 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	MZT2B	Q6NZ67	158 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	MFSD7	Q6UXD7	560 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	SCARA5	Q6ZMJ2	495 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	GDPGP1	Q6ZNW5	385 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	GPRIN3	Q6ZVF9	776 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	PGAP1	Q75T13	922 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	STRADA	Q7RTN6	431 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	KRT74	Q7RTS7	529 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	DPP9	Q86TI2	863 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CCDC190	Q86UF4	302 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	GATAD2A	Q86YP4	633 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	EPHX4	Q8IUS5	362 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	C10orf107	Q8IVU9	208 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	NKAIN4	Q8IVV8	208 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	ABRA	Q8N0Z2	381 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	PELI3	Q8N2H9	469 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	EIF4E3	Q8N5X7	224 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	PARP16	Q8N5Y8	322 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	MYCT1	Q8N699	235 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	C1orf52	Q8N6N3	182 aa	Known RBP	4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CDYL2	Q8N8U2	506 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	CAMKV	Q8NCB2	501 aa		4.59	□□□□□ -1.67
PTCD3-212	ENST00000477520	TMEM35B	Q8NCS4	154 aa		4.59	□□□□□ -1.67

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