RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ABHD14A-ACY1A0A1B0GW23 586 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 C7orf72A4D263 438 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 KRT8P05787 483 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RHOP08100 348 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 SOX6P35712 828 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ASMTP46597 345 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 DEFA1P59665 94 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 DEFA3P59666 94 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RGS21Q2M5E4 152 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ATAD3BQ5T9A4 648 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ZDHHC20Q5W0Z9 365 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 NOXRED1Q6NXP6 359 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 PTCHD4Q6ZW05 846 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 R3HCC1LQ7Z5L2 792 aaKnown RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 OOSP2Q86WS3 158 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 EZH1Q92800 747 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 PKP4Q99569 1192 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RAD18Q9NS91 495 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 KLHL28Q9NXS3 571 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RHCGQ9UBD6 479 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 FBXO9Q9UK97 447 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 OAS3Q9Y6K5 1087 aaKnown RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RGS10O43665 173 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ALPPL2P10696 532 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 NTSP30990 170 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RFC2P35250 354 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 VIPR2P41587 438 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 EIF2B2P49770 351 aaKnown RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 CLCN4P51793 760 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 PDCD4Q53EL6 469 aaKnown RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 FUNDC1Q8IVP5 155 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 SLC34A3Q8N130 599 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 KAT2AQ92830 837 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ZUFSPQ96AP4 578 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RAD51AP1Q96B01 352 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF419Q96HQ0 510 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 CHCHD6Q9BRQ6 235 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 TEKT2Q9UIF3 430 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 RIMS3Q9UJD0 308 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 FBXW2Q9UKT8 454 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 LOXHD1Q8IVV2 1947 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 A0A1B0GTL3 188 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 A0A1B0GVG6 124 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 HNRNPCL2B2RXH8 293 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 KRT75O95678 551 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 MMP2P08253 660 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 FGF4P08620 206 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 TFPTP0C1Z6 253 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 SRCP12931 536 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ENTPD1P49961 510 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 CDK9P50750 372 aaKnown RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 MYBPC1Q00872 1141 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 SPANXN2Q5MJ10 180 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 MANEALQ5VSG8 457 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 BRAT1Q6PJG6 821 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 VTCN1Q7Z7D3 282 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 GATAD2AQ86YP4 633 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 CLECL1Q8IZS7 167 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ARMC5Q96C12 935 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 IL4I1Q96RQ9 567 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF334Q9HCZ1 680 aaPredicted RBP10.72□□□□□ -0.69
COL27A1-204ENST00000477421 CD320Q9NPF0 282 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 AASSQ9UDR5 926 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 IL36AQ9UHA7 158 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 TAC3Q9UHF0 121 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 LRRC37AA6NMS7 1700 aa10.72□□□□□ -0.69
COL27A1-204ENST00000477421 NRXN2Q9P2S2 1712 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 GSAPA4D1B5 854 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 GLOD5A6NK44 160 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 MYL12BO14950 172 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 CXCR2P25025 360 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 ATP4BP51164 291 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 CLCNKAP51800 687 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 AP1S2P56377 157 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 TOP3AQ13472 1001 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-204ENST00000477421 NCF4Q15080 339 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 GCNT6Q5T4J0 391 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 PPP4R4Q6NUP7 873 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 ZFAND4Q86XD8 727 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 GPR65Q8IYL9 337 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 SCML4Q8N228 414 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 CLIP4Q8N3C7 705 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 CNIH3Q8TBE1 160 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 LINC01599Q8WXQ3 324 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 FOXJ1Q92949 421 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 TCEAL4Q96EI5 215 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 AIF1LQ9BQI0 150 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 BACE2Q9Y5Z0 518 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 CACNA1CQ13936 2221 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 RPS17P08708 135 aaKnown RBP10.71□□□□□ -0.69
COL27A1-204ENST00000477421 MTHFD2P13995 350 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 NOS3P29474 1203 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 KRT20P35900 424 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 STT3AP46977 705 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 ANXA11P50995 505 aaKnown RBP10.71□□□□□ -0.69
COL27A1-204ENST00000477421 TAS2R50P59544 299 aa10.71□□□□□ -0.69
COL27A1-204ENST00000477421 GALNT1Q10472 559 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms