RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CCL27Q9Y4X3 112 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 CAPN7Q9Y6W3 813 aa27.85■■■□□ 2.05
VEGFA-211ENST00000476772 TP53BP1Q12888 1972 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-211ENST00000476772 KDM1AO60341 852 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 NEK2P51955 445 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 KLF10Q13118 480 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 FRG2Q64ET8 278 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 ATG9BQ674R7 924 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 TRIM46Q7Z4K8 759 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 WDR34Q96EX3 536 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 FRG2BQ96QU4 278 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 TXLNGQ9NUQ3 528 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 USP34Q70CQ2 3546 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 PCM1Q15154 2024 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 SLC28A1O00337 649 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 UNC5CO95185 931 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 C1GALT1C1LP0DN25 315 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 CDH1P12830 882 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 SCTRP47872 440 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 C21orf59P57076 290 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 YBX1P67809 324 aaKnown RBP27.84■■■□□ 2.05
VEGFA-211ENST00000476772 NR6A1Q15406 480 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 NXPE4Q6UWF7 544 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 TRIM48Q8IWZ4 208 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 NAGSQ8N159 534 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 NSL1Q96IY1 281 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 PCBD2Q9H0N5 130 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 EHD1Q9H4M9 534 aa27.84■■■□□ 2.05
VEGFA-211ENST00000476772 LSM1O15116 133 aaKnown RBP27.83■■■□□ 2.05
VEGFA-211ENST00000476772 RGS14O43566 566 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 NCALDP61601 193 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 HMGCS1Q01581 520 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 ATP6AP1LQ52LC2 224 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 OGFOD2Q6N063 350 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 C11orf74Q86VG3 221 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 C17orf64Q86WR6 236 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 FAM46DQ8NEK8 389 aa27.83■■■□□ 2.05
VEGFA-211ENST00000476772 NCOR1O75376 2440 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 H0YIV9 168 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 XRCC1P18887 633 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-211ENST00000476772 SLBPQ14493 270 aaKnown RBP eCLIP27.82■■■□□ 2.04
VEGFA-211ENST00000476772 ELOCQ15369 112 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 IMPG1Q17R60 797 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 C6orf136Q5SQH8 315 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 WDR20Q8TBZ3 569 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 LMX1AQ8TE12 382 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 SLC37A2Q8TED4 501 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 LCN9Q8WX39 176 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 ACPTQ9BZG2 426 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 SLC40A1Q9NP59 571 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 GEMIN8Q9NWZ8 242 aaKnown RBP27.82■■■□□ 2.04
VEGFA-211ENST00000476772 CPNE7Q9UBL6 633 aa27.82■■■□□ 2.04
VEGFA-211ENST00000476772 TNRC6BQ9UPQ9 1833 aaKnown RBP27.82■■■□□ 2.04
VEGFA-211ENST00000476772 KIR2DS5A0A0G2JLQ3 304 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 A0A0G2JNG1 304 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 OR5K4A6NMS3 321 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 KIR2DS3K7RE56 304 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 PIK3R1P27986 724 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 SHMT2P34897 504 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 UBE2IP63279 158 aaKnown RBP27.81■■■□□ 2.04
VEGFA-211ENST00000476772 SQLEQ14534 574 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 KIR2DS5Q14953 304 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 NAA25Q14CX7 972 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 AMIGO1Q86WK6 493 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 RNF175Q8N4F7 328 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 OR4E2Q8NGC2 313 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 ZDHHC1Q8WTX9 485 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 TUBB6Q9BUF5 446 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 EFCAB11Q9BUY7 163 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 POT1Q9NUX5 634 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 TAGLN3Q9UI15 199 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 KNL1Q8NG31 2342 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 ZDBF2Q9HCK1 2354 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 HRO43593 1189 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 GPR37L1O60883 481 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 ATP5HO75947 161 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 VIPP01282 170 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 ESRRAP11474 423 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-211ENST00000476772 SLC2A4P14672 509 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 CD1EP15812 388 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 CALB2P22676 271 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 MEF2AQ02078 507 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-211ENST00000476772 PLK5Q496M5 336 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 SPATA19Q7Z5L4 167 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 FNDC5Q8NAU1 212 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 SPNS1Q9H2V7 528 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 CUEDC1Q9NWM3 386 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-211ENST00000476772 SPASTQ9UBP0 616 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 FBXO4Q9UKT5 387 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 PCDHGA11Q9Y5H2 935 aa27.81■■■□□ 2.04
VEGFA-211ENST00000476772 A0A1B0GVT2 93 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 B4DGG1 531 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 SLC22A2O15244 555 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 PEBP1P30086 187 aaKnown RBP27.8■■■□□ 2.04
VEGFA-211ENST00000476772 ADSLP30566 484 aaPredicted RBP27.8■■■□□ 2.04
VEGFA-211ENST00000476772 ATP4BP51164 291 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 HNRNPKP61978 463 aaKnown RBP eCLIP27.8■■■□□ 2.041e-6■■■■■ 33.6
VEGFA-211ENST00000476772 ERVK-8P63133 956 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 GPR18Q14330 331 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 AP5B1Q2VPB7 878 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms