RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 USP9YO00507 2555 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 MYO1CO00159 1063 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 ZSCAN9O15535 394 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 RAD51CO43502 376 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 MCM3P25205 808 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 PSMB5P28074 263 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 MRPS25P82663 173 aaKnown RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 CKAP4Q07065 602 aaKnown RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 TSTA3Q13630 321 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 ARHGAP19Q14CB8 494 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 NAA25Q14CX7 972 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 CYP2A13Q16696 494 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 FIGLAQ6QHK4 219 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 GALNT7Q86SF2 657 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 DNAJC22Q8N4W6 341 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 C16orf45Q96MC5 204 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 IP6K3Q96PC2 410 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 GBP5Q96PP8 586 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 MIPEPQ99797 713 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 WDR83Q9BRX9 315 aaKnown RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 ERP44Q9BS26 406 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 TXLNGQ9NUQ3 528 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 WHRNQ9P202 907 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 CORO1CQ9ULV4 474 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 MDC1Q14676 2089 aaKnown RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 CCDC88CQ9P219 2028 aa15.54■□□□□ 0.08
COL1A1-205ENST00000476387 PRRC2CQ9Y520 2896 aaKnown RBP15.54■□□□□ 0.08
COL1A1-205ENST00000476387 HCRTR1O43613 425 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 ZBTB14O43829 449 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 KLF7O75840 302 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 SYF2O95926 243 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 CMPK1P30085 196 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 RPA3P35244 121 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 HSD17B2P37059 387 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 SKIV2L2P42285 1042 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 MLLT10P55197 1068 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 FRG1Q14331 258 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 ZC3H12BQ5HYM0 836 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 RBM20Q5T481 1227 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 TEDDM1Q5T9Z0 273 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 TRMT10BQ6PF06 316 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 UBE2R2Q712K3 238 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 PALM2Q8IXS6 379 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 ZBED8Q8IZ13 594 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 GPATCH11Q8N954 259 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 FBXO15Q8NCQ5 510 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 FBXO36Q8NEA4 188 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 OR2L3Q8NG85 312 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 SMPDL3AQ92484 453 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 RAB17Q9H0T7 212 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 EURLQ9NYK6 297 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 ZFATQ9P243 1243 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 ANKMY1Q9P2S6 941 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 SLC17A6Q9P2U8 582 aa15.53■□□□□ 0.08
COL1A1-205ENST00000476387 UTP11Q9Y3A2 253 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 SPTAN1Q13813 2472 aaKnown RBP15.53■□□□□ 0.08
COL1A1-205ENST00000476387 TARM1B6A8C7 271 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 E7ESA3 106 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 TP73O15350 636 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 PRICKLE3O43900 615 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 AHSGP02765 367 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 ERGP11308 486 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 PNLIPRP1P54315 467 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 DCDP81605 110 aaKnown RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 PDAP1Q13442 181 aaKnown RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 ATP1A4Q13733 1029 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 FASTKQ14296 549 aaKnown RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 SSPNQ14714 243 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 FASTKD3Q14CZ7 662 aaKnown RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 FAM69BQ5VUD6 431 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 PIWIL4Q7Z3Z4 852 aaKnown RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 MCATQ8IVS2 390 aaKnown RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 MYO1HQ8N1T3 1032 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 FAM26EQ8N5C1 309 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 ZNF655Q8N720 491 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 ASB11Q8WXH4 323 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 DLG3Q92796 817 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 COL26A1Q96A83 441 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 ZUFSPQ96AP4 578 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 PKP4Q99569 1192 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 SELENOSQ9BQE4 189 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 NDC1Q9BTX1 674 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 ACAT2Q9BWD1 397 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 SPRTNQ9H040 489 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 PLAC1Q9HBJ0 212 aa15.52■□□□□ 0.08
COL1A1-205ENST00000476387 GPN3Q9UHW5 284 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-205ENST00000476387 TNRC6AQ8NDV7 1962 aaKnown RBP15.52■□□□□ 0.07
COL1A1-205ENST00000476387 A0A1W2PPV9 198 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 PABPN1LA6NDY0 278 aaKnown RBP15.51■□□□□ 0.07
COL1A1-205ENST00000476387 TTLL8A6PVC2 850 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 GFYI3L273 518 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 DPM1O60762 260 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 SORBS2O94875 1100 aaKnown RBP15.51■□□□□ 0.07
COL1A1-205ENST00000476387 CCNDBP1O95273 360 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 SLC16A8O95907 504 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 IGHEP01854 428 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 C8GP07360 202 aa15.51■□□□□ 0.07
COL1A1-205ENST00000476387 GABRB3P28472 473 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms