RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SYCE1LA8MT33 242 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 NCF1CA8MVU1 366 aaPredicted RBP28.44■■■□□ 2.14
HOXB3-208ENST00000476342 RFPL1O75677 317 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 MSL3P1P0C860 447 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 NCF1P14598 390 aaPredicted RBP28.44■■■□□ 2.14
HOXB3-208ENST00000476342 GRIA3P42263 894 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 GLRBP48167 497 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 TBC1D25Q3MII6 688 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 RIBC1Q8N443 379 aaPredicted RBP28.44■■■□□ 2.14
HOXB3-208ENST00000476342 OR2W6PQ8NHA6 318 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 ALKBH8Q96BT7 664 aaKnown RBP28.44■■■□□ 2.14
HOXB3-208ENST00000476342 RHBDF1Q96CC6 855 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 SGPP1Q9BX95 441 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 APMAPQ9HDC9 416 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 CD274Q9NZQ7 290 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 KLK4Q9Y5K2 254 aa28.44■■■□□ 2.14
HOXB3-208ENST00000476342 C9orf172C9J069 976 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 ZIC1Q15915 447 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 PPP1R3BQ86XI6 285 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 ACMSDQ8TDX5 336 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 N4BP2L2Q92802 583 aaPredicted RBP28.43■■■□□ 2.14
HOXB3-208ENST00000476342 EXT2Q93063 718 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 ATOH8Q96SQ7 321 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 CTRCQ99895 268 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 ROPN1BQ9BZX4 212 aaPredicted RBP28.43■■■□□ 2.14
HOXB3-208ENST00000476342 ROPN1Q9HAT0 212 aaPredicted RBP28.43■■■□□ 2.14
HOXB3-208ENST00000476342 PCMTD2Q9NV79 361 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 NUDT4Q9NZJ9 180 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 ANKMY1Q9P2S6 941 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 KLHL20Q9Y2M5 609 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 B3GALT1Q9Y5Z6 326 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 CHD8Q9HCK8 2581 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 PRAMEF10O60809 474 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 KRT15P19012 456 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 SLC5A2P31639 672 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 GPR19Q15760 415 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 SULT1C3Q6IMI6 304 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 LCTLQ6UWM7 567 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 CDHR3Q6ZTQ4 885 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 PLD6Q8N2A8 252 aaKnown RBP28.43■■■□□ 2.14
HOXB3-208ENST00000476342 PDPRQ8NCN5 879 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 OR8K5Q8NH50 307 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 MZB1Q8WU39 189 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 PYCR2Q96C36 320 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 HAUS8Q9BT25 410 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 DPH7Q9BTV6 452 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 CNOT10Q9H9A5 744 aaKnown RBP28.43■■■□□ 2.14
HOXB3-208ENST00000476342 EURLQ9NYK6 297 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 WWOXQ9NZC7 414 aa28.43■■■□□ 2.14
HOXB3-208ENST00000476342 HEATR5BQ9P2D3 2071 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 FREM2Q5SZK8 3169 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 TLDC2A0PJX2 215 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 TMEM8BA6NDV4 472 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 MT-ND3P03897 115 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 FGF5P12034 268 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 LCA5Q86VQ0 697 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 PMEPA1Q969W9 287 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 GPR78Q96P69 363 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 FAM60AQ9NP50 221 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 SLC6A20Q9NP91 592 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 PLAAQ9Y263 795 aa28.42■■■□□ 2.14
HOXB3-208ENST00000476342 FRYQ5TBA9 3013 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 SUPT3HB4E1H0 165 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 SUPT3HO75486 399 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 IPO13O94829 963 aaKnown RBP28.41■■■□□ 2.14
HOXB3-208ENST00000476342 RBP1P09455 135 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 HRH2P25021 359 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 CD82P27701 267 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 ZXDCQ2QGD7 858 aaPredicted RBP28.41■■■□□ 2.14
HOXB3-208ENST00000476342 PTCHD3Q3KNS1 767 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 ZC3H12BQ5HYM0 836 aaKnown RBP28.41■■■□□ 2.14
HOXB3-208ENST00000476342 FCRL6Q6DN72 434 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 C17orf64Q86WR6 236 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 ZNF501Q96CX3 271 aaPredicted RBP28.41■■■□□ 2.14
HOXB3-208ENST00000476342 FOXJ2Q9P0K8 574 aa28.41■■■□□ 2.14
HOXB3-208ENST00000476342 TMEM150CB9EJG8 249 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 KCNC1P48547 511 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 YBX1P67809 324 aaKnown RBP28.4■■■□□ 2.14
HOXB3-208ENST00000476342 LARP7Q4G0J3 582 aaKnown RBP eCLIP28.4■■■□□ 2.14
HOXB3-208ENST00000476342 TECRLQ5HYJ1 363 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 FGF11Q92914 225 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 SCYL1Q96KG9 808 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 FCRL4Q96PJ5 515 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 ZNF358Q9NW07 568 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 ACSL6Q9UKU0 697 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 SNX7Q9UNH6 387 aa28.4■■■□□ 2.14
HOXB3-208ENST00000476342 OR2A25A4D2G3 310 aa28.39■■■□□ 2.14
HOXB3-208ENST00000476342 ADCK2Q7Z695 626 aa28.39■■■□□ 2.14
HOXB3-208ENST00000476342 DNAJC22Q8N4W6 341 aa28.39■■■□□ 2.14
HOXB3-208ENST00000476342 PLCD4Q9BRC7 762 aa28.39■■■□□ 2.14
HOXB3-208ENST00000476342 SERTAD3Q9UJW9 196 aa28.39■■■□□ 2.14
HOXB3-208ENST00000476342 PLCL2Q9UPR0 1127 aa28.39■■■□□ 2.14
HOXB3-208ENST00000476342 UBXN8O00124 270 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 NPPBP16860 134 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 GGT5P36269 586 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 SLC6A12P48065 614 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 PCBP4P57723 403 aaKnown RBP28.38■■■□□ 2.13
HOXB3-208ENST00000476342 DEFB110Q30KQ9 67 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 THOC6Q86W42 341 aaKnown RBP28.38■■■□□ 2.13
HOXB3-208ENST00000476342 KLHDC8AQ8IYD2 350 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms