RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 SELENOSQ9BQE4 189 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 H2AFJQ9BTM1 129 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 NDC1Q9BTX1 674 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 RHOJQ9H4E5 214 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 ACTL8Q9H568 366 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 PARVBQ9HBI1 364 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 STARD5Q9NSY2 213 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 DHCR7Q9UBM7 475 aaKnown RBP11.13□□□□□ -0.63
BRD9-203ENST00000475706 PDE10AQ9Y233 779 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
BRD9-203ENST00000475706 TNRC6AQ8NDV7 1962 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 TCRBV9S1A1TA0A576 114 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 CXorf49A8MYA2 514 aaPredicted RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 C9J4A7 227 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 TERTO14746 1132 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 SLC16A5O15375 505 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ZSCAN9O15535 394 aaPredicted RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 NRP2O60462 931 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 CTSVO60911 334 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ITGB2P05107 769 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 EIF2S1P05198 315 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 GSTA2P09210 222 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 PTPN4P29074 926 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 IMPA1P29218 277 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 RORAP35398 523 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 GPX6P59796 221 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 SP140Q13342 867 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ZNF460Q14592 562 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ICE2Q659A1 982 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 BORAQ6PGQ7 559 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 MBOAT1Q6ZNC8 495 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ENDOVQ8N8Q3 282 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 NOA1Q8NC60 698 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 LSM14AQ8ND56 463 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 IFT81Q8WYA0 676 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 MED8Q96G25 268 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 WBP1Q96G27 269 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 GPR87Q9BY21 358 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ATG10Q9H0Y0 220 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 SLC6A20Q9NP91 592 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 STOX2Q9P2F5 926 aaPredicted RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 GPN3Q9UHW5 284 aaPredicted RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 DMGDHQ9UI17 866 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 SRPK3Q9UPE1 567 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
BRD9-203ENST00000475706 PCDHGA6Q9Y5G7 932 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 ATRXP46100 2492 aa11.12□□□□□ -0.63
BRD9-203ENST00000475706 LOC105369274A0A096LPK9 316 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 LOC102723532A0A0G2JNH3 316 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 FAM159BA6NKW6 160 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 TK2O00142 265 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 GUCA1CO95843 209 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 CCR10P46092 362 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 ARSFP54793 590 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 DCDP81605 110 aaKnown RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 PRDX1Q06830 199 aaKnown RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 NAE1Q13564 534 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 GRM7Q14831 915 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 SLC9A5Q14940 896 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 PHKG1Q16816 387 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 TCTE1Q5JU00 501 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 WASHC2DQ5SRD0 308 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 FRMPD2BQ6IN97 320 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 RHBDD2Q6NTF9 364 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 AGTRAPQ6RW13 159 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 TMEM207Q6UWW9 146 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 TTLL10Q6ZVT0 673 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 LRRC56Q8IYG6 542 aaPredicted RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 OR4N4Q8N0Y3 316 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 NKAPQ8N5F7 415 aaKnown RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 PPM1NQ8N819 430 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 EXD3Q8N9H8 876 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 FBF1Q8TES7 1133 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 CPNE1Q99829 537 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 PHACTR1Q9C0D0 580 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 LRRC4CQ9HCJ2 640 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 CUEDC1Q9NWM3 386 aaPredicted RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 ARL15Q9NXU5 204 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 UTP6Q9NYH9 597 aaKnown RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 MTRF1LQ9UGC7 380 aaKnown RBP11.11□□□□□ -0.63
BRD9-203ENST00000475706 SNX7Q9UNH6 387 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 POLHQ9Y253 713 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
BRD9-203ENST00000475706 DOCK10Q96BY6 2186 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 OR2A25A4D2G3 310 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 NPEPPSL1A6NEC2 478 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 H3BMH7 237 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 H7BY64 318 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 SRPX2O60687 465 aaPredicted RBP11.1□□□□□ -0.63
BRD9-203ENST00000475706 TSPAN12O95859 305 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 FURINP09958 794 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 RAB40ALP0C0E4 278 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 FAM87AP0C7U9 286 aa11.1□□□□□ -0.63
BRD9-203ENST00000475706 ZNF37AP17032 561 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms