RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NEMP2A6NFY4 417 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 TMEM202A6NGA9 273 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 UBXN8O00124 270 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 MYO1CO00159 1063 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 MATN2O00339 956 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CLGNO14967 610 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 AZIN1O14977 448 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 VILLO15195 856 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 YKT6O15498 198 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 DXOO77932 396 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KIAA0754O94854 1291 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CLDN9O95484 217 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 LDOC1O95751 146 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KRT6AP02538 564 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KRT6BP04259 564 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 RPS17P08708 135 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 THEGLP0DJG4 465 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 EZRP15311 586 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 ALOX15P16050 662 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 XRCC1P18887 633 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 GNAZP19086 355 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 EEF1DP29692 281 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CA5AP35218 305 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 HNF4AP41235 474 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CASP2P42575 452 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CTSKP43235 329 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KRT6CP48668 564 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CCNG1P51959 295 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 HK3P52790 923 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 C21orf59P57076 290 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 PPP2CBP62714 309 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 PPP2CAP67775 309 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 ABATP80404 500 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 GTF2H2Q13888 395 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KHDC1Q4VXA5 237 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 PAGE2BQ5JRK9 111 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 GTF2H2CQ6P1K8 395 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KLHL35Q6PF15 583 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 DOK6Q6PKX4 331 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 FAM47EQ6ZV65 393 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CUZD1Q86UP6 607 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 PARGQ86W56 976 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 GKN2Q86XP6 184 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CACUL1Q86Y37 369 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF843Q8N446 348 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 TBC1D19Q8N5T2 526 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 OR56A3Q8NH54 315 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 OR5K2Q8NHB8 316 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 GPBAR1Q8TDU6 330 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 ACTRT2Q8TDY3 377 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF483Q8TF39 744 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 KLK6Q92876 244 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 FAM136AQ96C01 138 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 RILPQ96NA2 401 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 FERD3LQ96RJ6 166 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 MECRQ9BV79 373 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 C12orf65Q9H3J6 166 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 EHD1Q9H4M9 534 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 IPPKQ9H8X2 491 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CARS2Q9HA77 564 aaKnown RBP6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CYP4F12Q9HCS2 524 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 SAR1AQ9NR31 198 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 AASDHPPTQ9NRN7 309 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 GPR27Q9NS67 375 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 DNAJC11Q9NVH1 559 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 RIC8BQ9NVN3 520 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 SPASTQ9UBP0 616 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 SNX6Q9UNH7 406 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 MAPRE3Q9UPY8 281 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 DNAJC16Q9Y2G8 782 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 CSNK1G3Q9Y6M4 447 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 COL6A6A6NMZ7 2263 aa6.81□□□□□ -1.32
SHQ1-207ENST00000475558 MAST4O15021 2626 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 PRR19A6NJB7 356 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 CCT8L1PA6NM43 557 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 J3QKU1 62 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 SLC28A1O00337 649 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 E2F3O00716 465 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 GPR37O15354 613 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 GPR39O43194 453 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 TLX3O43711 291 aaPredicted RBP6.8□□□□□ -1.32
SHQ1-207ENST00000475558 CCNT2O60583 730 aaKnown RBP6.8□□□□□ -1.32
SHQ1-207ENST00000475558 ULK1O75385 1050 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 RFPL3O75679 317 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 CCNDBP1O95273 360 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 GUCA1CO95843 209 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 CSF2P04141 144 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 SERPINA6P08185 405 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 HGFP14210 728 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 GSTM2P28161 218 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 SERPINB1P30740 379 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 GNPDA1P46926 289 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 CFHR1Q03591 330 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 RELAQ04206 551 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 TARDBPQ13148 414 aaKnown RBP eCLIP6.8□□□□□ -1.32
SHQ1-207ENST00000475558 MAD2L1Q13257 205 aaPredicted RBP6.8□□□□□ -1.32
SHQ1-207ENST00000475558 NFE2L1Q14494 772 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 ZSCAN26Q16670 478 aa6.8□□□□□ -1.32
SHQ1-207ENST00000475558 CYP2A13Q16696 494 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms