RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 LDLRP01130 860 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 EIF2S1P05198 315 aaKnown RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 CD63P08962 238 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TPSB2P20231 275 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 CHRM3P20309 590 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 ITGA3P26006 1051 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 COL8A1P27658 744 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 MAGEA6P43360 314 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 ARF3P61204 181 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TIAL1Q01085 375 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TAP2Q03519 686 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 KLC1Q07866 573 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 AIMP2Q13155 320 aaKnown RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 KCNJ11Q14654 390 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TPSAB1Q15661 275 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 PRTGQ2VWP7 1150 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 FAM214AQ32MH5 1076 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 VWA2Q5GFL6 755 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TCTE1Q5JU00 501 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 YOD1Q5VVQ6 348 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 NEPROQ6NW34 567 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 SUSD1Q6UWL2 747 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 RNF44Q7L0R7 432 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 GSTA5Q7RTV2 222 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 PAQR7Q86WK9 346 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 CILP2Q8IUL8 1156 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 LURAP1LQ8IV03 231 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 DENND6AQ8IWF6 608 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 REXO1L1PQ8IX06 675 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 IQCKQ8N0W5 287 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 CATSPER1Q8NEC5 780 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 STT3BQ8TCJ2 826 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 SKA2Q8WVK7 121 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 PSMF1Q92530 271 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 DLG3Q92796 817 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 C8orf44Q96CB5 159 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 MS4A14Q96JA4 679 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 OR2A5Q96R48 311 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TCF12Q99081 682 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 SELENOSQ9BQE4 189 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 DPH7Q9BTV6 452 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 ACAT2Q9BWD1 397 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 TSSK1BQ9BXA7 367 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 CUEDC1Q9NWM3 386 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 SEC16AO15027 2179 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 IGLV3-12A0A075B6K2 115 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 A1L4Q6 167 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ANKUB1A6NFN9 424 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 F8W8V4 182 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 GFYI3L273 518 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 KPNA5O15131 536 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 FOXS1O43638 330 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 FKBP9O95302 570 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 SLC16A8O95907 504 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 IGHEP01854 428 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ESR1P03372 595 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ALPPP05187 535 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CELA2AP08217 269 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZGLP1P0C6A0 271 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 PKMP14618 531 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ATP5DP30049 168 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CCNFP41002 786 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 GLRBP48167 497 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 VPS41P49754 854 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CCZ1BP86790 482 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CCZ1P86791 482 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CDK16Q00536 496 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 GPS1Q13098 491 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CTBP1Q13363 440 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CUL1Q13616 776 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 TMED2Q15363 201 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZXDCQ2QGD7 858 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 HKDC1Q2TB90 917 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 KLHL38Q2WGJ6 581 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ANKRD20A4Q4UJ75 823 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 AGAP7PQ5VUJ5 663 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 KIAA0930Q6ICG6 404 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF425Q6IV72 752 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 MRNIPQ6NTE8 343 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 TTC23LQ6PF05 361 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 C4orf22Q6V702 233 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 SDCCAG8Q86SQ7 713 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 KCNMB4Q86W47 210 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 LRRC8AQ8IWT6 810 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 PRSS58Q8IYP2 241 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZADH2Q8N4Q0 377 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 AMER3Q8N944 861 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 PPFIBP2Q8ND30 876 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 OR9A1PQ8NGU1 263 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 DNAJB14Q8TBM8 379 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF480Q8WV37 535 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 SIGLEC10Q96LC7 697 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 AGAP4Q96P64 663 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZFYVE21Q9BQ24 234 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 WDR77Q9BQA1 342 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 PLCD4Q9BRC7 762 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 RAB11FIP5Q9BXF6 653 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF304Q9HCX3 659 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms