RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 DERAQ9Y315 318 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 UNC80Q8N2C7 3258 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 C9orf170A2RU37 121 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 CLCA1A8K7I4 914 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 HS6ST1O60243 411 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 DAB1O75553 588 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 CCNKO75909 580 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 LDLRP01130 860 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 POMCP01189 267 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 LCKP06239 509 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 POLBP06746 335 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 ATXN1LP0C7T5 689 aaKnown RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 ENO3P13929 434 aaPredicted RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 CHRNA5P30532 468 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 SLC1A2P43004 574 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 KCNJ5P48544 419 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 ALDH9A1P49189 494 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 KCNQ1P51787 676 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 NAGLUP54802 743 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 RRAS2P62070 204 aaPredicted RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 PRAMEP78395 509 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 HGFACQ04756 655 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 PTPN11Q06124 597 aaPredicted RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 PUDPQ08623 228 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 DSC3Q14574 896 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 OR4D1Q15615 310 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 SLC10A6Q3KNW5 377 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 FAM98BQ52LJ0 330 aaKnown RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 ZRANB3Q5FWF4 1079 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 PAGE2BQ5JRK9 111 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 SLFN12LQ6IEE8 588 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 NOTUMQ6P988 496 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 LRFN4Q6PJG9 635 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 RNF19BQ6ZMZ0 732 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 TAS2R42Q7RTR8 314 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 EFL1Q7Z2Z2 1120 aaKnown RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 STRA8Q7Z7C7 330 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 NR2C2APQ86WQ0 139 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 KLBQ86Z14 1044 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 SP8Q8IXZ3 490 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 HS3ST5Q8IZT8 346 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 RNF148Q8N7C7 305 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 YIPF7Q8N8F6 280 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 GOT1L1Q8NHS2 421 aaPredicted RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 KCTD4Q8WVF5 259 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 CREB3L1Q96BA8 519 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 ZBTB45Q96K62 511 aaPredicted RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 TMEM209Q96SK2 561 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 TMEM43Q9BTV4 400 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 HTATIP2Q9BUP3 242 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 SEMA4CQ9C0C4 833 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 NOL6Q9H6R4 1146 aaKnown RBP3.99□□□□□ -1.77
USP16-205ENST00000474835 RNF121Q9H920 327 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 SMURF2Q9HAU4 748 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 PLEKHA1Q9HB21 404 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 THSD1Q9NS62 852 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 OR12D3Q9UGF7 316 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 PRELID3BQ9Y3B1 194 aa3.99□□□□□ -1.77
USP16-205ENST00000474835 C12orf71A8MTZ7 269 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PIK3R2O00459 728 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PPEF2O14830 753 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HCN1O60741 890 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 LDOC1O95751 146 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 IFNGP01579 166 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CD4P01730 458 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PSMB4P28070 264 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 EVI2BP34910 448 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 RPS19P39019 145 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 MBTD1Q05BQ5 628 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 OLIG2Q13516 323 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PLCL1Q15111 1095 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 GPR19Q15760 415 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF789Q5FWF6 425 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 C6orf132Q5T0Z8 1188 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF517Q6ZMY9 492 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 COLGALT1Q8NBJ5 622 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 FAM98AQ8NCA5 519 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 MCPH1Q8NEM0 835 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 OR4K2Q8NGD2 314 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 VANGL1Q8TAA9 524 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.98□□□□□ -1.778e-6■□□□□ 10.5
USP16-205ENST00000474835 XAGE5Q8WWM1 108 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CRELD1Q96HD1 420 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 MS4A3Q96HJ5 214 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TMEM176AQ96HP8 235 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 RPL10LQ96L21 214 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF717Q9BY31 904 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 NMUR1Q9HB89 426 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 MRPL17Q9NRX2 175 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 SETD4Q9NVD3 440 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 AP4E1Q9UPM8 1137 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZFR2Q9UPR6 939 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 SLC12A8A0AV02 714 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 RPL36A-HNRNPH2H7BZ11 118 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 OR7A17O14581 309 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TNPO2O14787 897 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 PPIHO43447 177 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 GAS7O60861 476 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SEMA7AO75326 666 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PAGE1O75459 146 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms