RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SHBGP04278 402 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 NPPBP16860 134 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 HRH2P25021 359 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 TYK2P29597 1187 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 GMPRP36959 345 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 EIF2S3P41091 472 aaKnown RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SLC6A12P48065 614 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 MAPK10P53779 464 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 TBPL1P62380 186 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 YBX1P67809 324 aaKnown RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 TUBB3Q13509 450 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 CSHL1Q14406 222 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 KCNAB1Q14722 419 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 ACAP2Q15057 778 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 FIGLAQ6QHK4 219 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SUSD1Q6UWL2 747 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 LCTLQ6UWM7 567 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SH2D5Q6ZV89 423 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 TBC1D1Q86TI0 1168 aaPredicted RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 LCA5Q86VQ0 697 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SPATA6LQ8N4H0 392 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 PPFIBP2Q8ND30 876 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 STAG3L4Q8TBR4 150 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 ZCCHC14Q8WYQ9 949 aaKnown RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 RHBDF1Q96CC6 855 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 MRRFQ96E11 262 aaKnown RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 CCDC77Q9BR77 488 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SARGQ9BW04 601 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 SLC6A20Q9NP91 592 aa16.28■□□□□ 0.2
SCAF11-206ENST00000474828 CCDC177Q9NQR7 707 aaPredicted RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 PSMC3IPQ9P2W1 217 aaPredicted RBP16.28■□□□□ 0.2
SCAF11-206ENST00000474828 ANKRD11Q6UB99 2663 aaPredicted RBP16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TRIM49D1C9J1S8 452 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 HCRTR1O43613 425 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 KLK8O60259 260 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 CCNDBP1O95273 360 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 ANXA5P08758 320 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 MTHFD2P13995 350 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 CMPK1P30085 196 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 RPA3P35244 121 aaPredicted RBP16.27■□□□□ 0.2
SCAF11-206ENST00000474828 PCBP4P57723 403 aaKnown RBP16.27■□□□□ 0.2
SCAF11-206ENST00000474828 IRF9Q00978 393 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 FAM83EQ2M2I3 478 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 FOXR1Q6PIV2 292 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 RAPH1Q70E73 1250 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 RNF44Q7L0R7 432 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TAX1BP1Q86VP1 789 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 PAQR7Q86WK9 346 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 PPP1R3BQ86XI6 285 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 FAM20CQ8IXL6 584 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TCAIMQ8N3R3 496 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 ZNF248Q8NDW4 579 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 ABHD11Q8NFV4 315 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 OR4K1Q8NGD4 311 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 ACMSDQ8TDX5 336 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 KCTD4Q8WVF5 259 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 NXNL1Q96CM4 212 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 OR4K3Q96R72 315 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 MIPEPQ99797 713 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 PLCD4Q9BRC7 762 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TMEM109Q9BVC6 243 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 DPH1Q9BZG8 443 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TAC3Q9UHF0 121 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 PTBP2Q9UKA9 531 aaKnown RBP16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TLK1Q9UKI8 766 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 RALYQ9UKM9 306 aaKnown RBP16.27■□□□□ 0.2
SCAF11-206ENST00000474828 RARRES3Q9UL19 164 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 PCDHB3Q9Y5E6 796 aa16.27■□□□□ 0.2
SCAF11-206ENST00000474828 TAPBPO15533 448 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 MAP3K7O43318 606 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 CTSVO60911 334 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 SNRNP200O75643 2136 aaKnown RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 LIPCP11150 499 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 TFEBP19484 476 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 ARL4DP49703 201 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 PCDH1Q08174 1060 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 NAE1Q13564 534 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 NAA30Q147X3 362 aaPredicted RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 GPR19Q15760 415 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 TAF1BQ53T94 588 aaPredicted RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 PRAMEF13Q5VWM6 474 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 CAPN13Q6MZZ7 669 aaPredicted RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 PWWP2BQ6NUJ5 590 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 FBXO42Q6P3S6 717 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 ZNF517Q6ZMY9 492 aaPredicted RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 GPSM1Q86YR5 675 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 PLD6Q8N2A8 252 aaKnown RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 TMEM151AQ8N4L1 468 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 OR1L3Q8NH93 324 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 UBLCP1Q8WVY7 318 aaPredicted RBP16.26■□□□□ 0.19
SCAF11-206ENST00000474828 CABS1Q96KC9 395 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 LRFN5Q96NI6 719 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 CTRCQ99895 268 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 HAUS8Q9BT25 410 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 DPH7Q9BTV6 452 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 SOHLH2Q9NX45 425 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 SNX7Q9UNH6 387 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 PLCL2Q9UPR0 1127 aa16.26■□□□□ 0.19
SCAF11-206ENST00000474828 KCNE1BA0A087WTH5 132 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 IQANK1A0A1B0GTG1 560 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms