RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ALBP02768 609 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 IVDP26440 423 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 OR1D4P47884 311 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 SOX8P57073 446 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 MPP1Q00013 466 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 CUL1Q13616 776 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 THOC5Q13769 683 aaKnown RBP17.75■□□□□ 0.43
COL7A1-209ENST00000474432 LONRF1Q17RB8 773 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 PAQR7Q86WK9 346 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 PPIL6Q8IXY8 311 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 RAB42Q8N4Z0 105 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 FBXO15Q8NCQ5 510 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-209ENST00000474432 CD200R1Q8TD46 325 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 ZNF480Q8WV37 535 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 ASB11Q8WXH4 323 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 KCNJ9Q92806 393 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 ZNF552Q9H707 407 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-209ENST00000474432 WDR54Q9H977 334 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 PLAC1Q9HBJ0 212 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 C20orf96Q9NUD7 363 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-209ENST00000474432 STOX2Q9P2F5 926 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-209ENST00000474432 CTSFQ9UBX1 484 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 FBXO5Q9UKT4 447 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 DHRS7Q9Y394 339 aa17.75■□□□□ 0.43
COL7A1-209ENST00000474432 HYKKA2RU49 373 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 CTAGE9A4FU28 777 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 VSTM2BA6NLU5 285 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 TTLL8A6PVC2 850 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 E5RI56 91 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 E7ENX8 843 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 GFYI3L273 518 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 SOCS6O14544 535 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 SLC16A8O95907 504 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 MMP11P24347 488 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 GABRB3P28472 473 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 TAP2Q03519 686 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 UBAP2LQ14157 1087 aaKnown RBP17.74■□□□□ 0.43
COL7A1-209ENST00000474432 ARHGAP19Q14CB8 494 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 PRTGQ2VWP7 1150 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 MSS51Q4VC12 460 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 PRR30Q53SZ7 412 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-209ENST00000474432 HSP90AA5PQ58FG0 334 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 SLC6A19Q695T7 634 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 ZNF425Q6IV72 752 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 LMNTD2Q8IXW0 634 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 METTL27Q8N6F8 245 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-209ENST00000474432 PPFIBP2Q8ND30 876 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 SMPDL3AQ92484 453 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 C10orf90Q96M02 699 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 FER1L6-AS2Q96M78 137 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 GPR21Q99679 349 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 PLCD4Q9BRC7 762 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 MESP1Q9BRJ9 268 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 MFRPQ9BY79 579 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 DDX47Q9H0S4 455 aaKnown RBP17.74■□□□□ 0.43
COL7A1-209ENST00000474432 TRMT1Q9NXH9 659 aaKnown RBP17.74■□□□□ 0.43
COL7A1-209ENST00000474432 LUZP4Q9P127 313 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 HS3ST3B1Q9Y662 390 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 MAD1L1Q9Y6D9 718 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 MAST4O15021 2626 aa17.74■□□□□ 0.43
COL7A1-209ENST00000474432 USP27XA6NNY8 438 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 H0YGG7 62 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 DPM1O60762 260 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 BANF1O75531 89 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 CATP04040 527 aaKnown RBP17.73■□□□□ 0.43
COL7A1-209ENST00000474432 MPC1LP0DKB6 136 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 CMPK1P30085 196 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 UQCRFS1P47985 274 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 PNLIPRP1P54315 467 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 ARF3P61204 181 aaPredicted RBP17.73■□□□□ 0.43
COL7A1-209ENST00000474432 MYBPC3Q14896 1274 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 FAM214AQ32MH5 1076 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 SHISA6Q6ZSJ9 500 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 HPS6Q86YV9 775 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 IGDCC3Q8IVU1 814 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 GALNT16Q8N428 558 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 ARHGEF39Q8N4T4 335 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 TTC29Q8NA56 475 aaPredicted RBP17.73■□□□□ 0.43
COL7A1-209ENST00000474432 CPT1CQ8TCG5 803 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 GRK7Q8WTQ7 553 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 INPP5DQ92835 1189 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 SLCO2A1Q92959 643 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 NACC2Q96BF6 587 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 ZFYVE21Q9BQ24 234 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 AARSD1Q9BTE6 412 aaKnown RBP17.73■□□□□ 0.43
COL7A1-209ENST00000474432 ZBTB20Q9HC78 741 aaPredicted RBP17.73■□□□□ 0.43
COL7A1-209ENST00000474432 FAM114A2Q9NRY5 505 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 C5AR2Q9P296 337 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 ZC3H7BQ9UGR2 993 aaKnown RBP17.73■□□□□ 0.43
COL7A1-209ENST00000474432 MAU2Q9Y6X3 613 aa17.73■□□□□ 0.43
COL7A1-209ENST00000474432 AGPSO00116 658 aa17.72■□□□□ 0.43
COL7A1-209ENST00000474432 PEX12O00623 359 aa17.72■□□□□ 0.43
COL7A1-209ENST00000474432 DNALI1O14645 258 aaPredicted RBP17.72■□□□□ 0.43
COL7A1-209ENST00000474432 ZSCAN12O43309 604 aa17.72■□□□□ 0.43
COL7A1-209ENST00000474432 SKIV2L2P42285 1042 aaKnown RBP17.72■□□□□ 0.43
COL7A1-209ENST00000474432 SNRPNP63162 240 aaKnown RBP17.72■□□□□ 0.43
COL7A1-209ENST00000474432 PRDX1Q06830 199 aaKnown RBP17.72■□□□□ 0.43
COL7A1-209ENST00000474432 DHX9Q08211 1270 aaKnown RBP17.72■□□□□ 0.43
COL7A1-209ENST00000474432 PTK6Q13882 451 aa17.72■□□□□ 0.43
COL7A1-209ENST00000474432 CRYMQ14894 314 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms