RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 EXT2Q93063 718 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 ALKBH8Q96BT7 664 aaKnown RBP9.98□□□□□ -0.81
CASC3-204ENST00000474190 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 TGM7Q96PF1 710 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 FAM111AQ96PZ2 611 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 TRAPPC9Q96Q05 1148 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 TMEM237Q96Q45 408 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 MIPEPQ99797 713 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 MECRQ9BV79 373 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 CD244Q9BZW8 370 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 KLHL25Q9H0H3 589 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 STN1Q9H668 368 aaKnown RBP9.98□□□□□ -0.81
CASC3-204ENST00000474190 TNFRSF12AQ9NP84 129 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 ENAMQ9NRM1 1142 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 CD274Q9NZQ7 290 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 COPG2Q9UBF2 871 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 TAC3Q9UHF0 121 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 PILRAQ9UKJ1 303 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 PCTPQ9UKL6 214 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 SLC22A14Q9Y267 594 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 ENTPD2Q9Y5L3 495 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
CASC3-204ENST00000474190 KNTC1P50748 2209 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ITPR1Q14643 2758 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 KCNE1BA0A087WTH5 132 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 OR2A25A4D2G3 310 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 SLC9B1P1A6NJY1 282 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 C2orf74A8MZ97 194 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 SUPT3HB4E1H0 165 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 STX16-NPEPL1H3BU86 382 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 UBFD1O14562 309 aaKnown RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 STX16O14662 325 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 SUPT3HO75486 399 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 STK16O75716 305 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ANXA5P08758 320 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 AMD1P17707 334 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 MAGP20916 626 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ATP5F1P24539 256 aaPredicted RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 OAS2P29728 719 aaKnown RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 CCKBRP32239 447 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CCR10P46092 362 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 GCGRP47871 477 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CCT5P48643 541 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CSNK1G2P78368 415 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 E2F1Q01094 437 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ISXQ2M1V0 245 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ZNF678Q5SXM1 525 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CATSPEREQ5SY80 951 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 HES3Q5TGS1 186 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ICE2Q659A1 982 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 FBXO42Q6P3S6 717 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 LCTLQ6UWM7 567 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 SLCO4C1Q6ZQN7 724 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CROCCP2Q86T23 111 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 THOC6Q86W42 341 aaKnown RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 PAQR7Q86WK9 346 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 C10orf107Q8IVU9 208 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 SYTL1Q8IYJ3 562 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 LSMEM2Q8N112 164 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 FBXO39Q8N4B4 442 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ARHGEF39Q8N4T4 335 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 DNAJC22Q8N4W6 341 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 RCBTB1Q8NDN9 531 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 OR4K1Q8NGD4 311 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ZNF483Q8TF39 744 aaPredicted RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 NEIL2Q969S2 332 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 PMEPA1Q969W9 287 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 PHF21BQ96EK2 531 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 L3HYPDHQ96EM0 354 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 WDR34Q96EX3 536 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 SCYL1Q96KG9 808 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ZNF285Q96NJ3 590 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 FCRL4Q96PJ5 515 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 GFM1Q96RP9 751 aaKnown RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 SMC6Q96SB8 1091 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ACAT2Q9BWD1 397 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 RAB11FIP5Q9BXF6 653 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CHRNA10Q9GZZ6 450 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 CENPHQ9H3R5 247 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 GSTO2Q9H4Y5 243 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 ZNF768Q9H5H4 540 aaKnown RBP9.97□□□□□ -0.81
CASC3-204ENST00000474190 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 LNPEPQ9UIQ6 1025 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 BTRCQ9Y297 605 aa9.97□□□□□ -0.81
CASC3-204ENST00000474190 A0A0J9YY10 115 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 TMEM120BA0PK00 339 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 FAM149AA5PLN7 773 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 TLCD2A6NGC4 264 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 SYCE1LA8MT33 242 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 E7EQ34 232 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 OR7A17O14581 309 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 TOX3O15405 576 aaPredicted RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 WFS1O76024 890 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 IPO13O94829 963 aaKnown RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 BPGMP07738 259 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 FGF3P11487 239 aaPredicted RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 FOLR1P15328 257 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 NELFEP18615 380 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms