RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GLIS2Q9BZE0 524 aaPredicted RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 NYXQ9GZU5 481 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 INTS2Q9H0H0 1204 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GOLPH3LQ9H4A5 285 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GRPEL1Q9HAV7 217 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 AATFQ9NY61 560 aaKnown RBP eCLIP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 RRN3Q9NYV6 651 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GGA3Q9NZ52 723 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 HCN3Q9P1Z3 774 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ZNF107Q9UII5 783 aaPredicted RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 A4GNTQ9UNA3 340 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SMC3Q9UQE7 1217 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 DGKBQ9Y6T7 804 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 DDX49Q9Y6V7 483 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 MYO16Q9Y6X6 1858 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 TSC2P49815 1807 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 KIAA0100Q14667 2235 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SHROOM3Q8TF72 1996 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CASP8AP2Q9UKL3 1982 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 MUC3AQ02505 3323 aa1.46□□□□□ -2.17
CCDC39-203ENST00000473854 BRWD1Q9NSI6 2320 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MYLKQ15746 1914 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MIA3Q5JRA6 1907 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 FAM205AQ6ZU69 1335 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 ANKRD12Q6UB98 2062 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 NLRC5Q86WI3 1866 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PRRC2BQ5JSZ5 2229 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PATJQ8NI35 1801 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 A0A1W2PP11 408 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 FAM90A26D6RGX4 464 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TAF4O00268 1085 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KLF11O14901 512 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 NMT2O60551 498 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PRDM1O75626 825 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 EIF3JO75822 258 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 UFL1O94874 794 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MLYCDO95822 493 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MBD3O95983 291 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KRT6AP02538 564 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KRT6BP04259 564 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PYGLP06737 847 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 LIPFP07098 398 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KRT19P08727 400 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MMP10P09238 476 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 COX7A2P14406 83 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 UGT1A1P22309 533 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PSMA5P28066 241 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 RFC4P35249 363 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KRT6CP48668 564 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TDO2P48775 406 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PPM1FP49593 454 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 UFM1P61960 85 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 RPS8P62241 208 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 UBE2HP62256 183 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 CDR2Q01850 454 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MECOMQ03112 1051 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 DRAP1Q14919 205 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 E2F5Q15329 346 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 ZRSR2Q15696 482 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 IMMTQ16891 758 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 COL28A1Q2UY09 1125 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PRR30Q53SZ7 412 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 C6orf141Q5SZD1 244 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC183Q5T5S1 534 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 NAA16Q6N069 864 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PAPD4Q6PIY7 484 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 RBM43Q6ZSC3 357 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 C15orf52Q6ZUT6 534 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 BBS12Q6ZW61 710 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TICAM2Q86XR7 235 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF354CQ86Y25 554 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 CERS5Q8N5B7 392 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 GBGT1Q8N5D6 347 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TDRD7Q8NHU6 1098 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 NCOA7Q8NI08 942 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TBC1D16Q8TBP0 767 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MIPOL1Q8TD10 442 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 UTP15Q8TED0 518 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 ZFAND2BQ8WV99 257 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 HERVK_113Q902F9 699 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 DYNLL2Q96FJ2 89 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF274Q96GC6 653 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KLHL15Q96M94 604 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 C1orf147Q96MC9 270 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 LBHD1Q9BQE6 289 aaPredicted RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM47Q9BQJ4 181 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 PCGF1Q9BSM1 259 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 DGCR6LQ9BY27 220 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 NAPBQ9H115 298 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 CLSTN2Q9H4D0 955 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 DNAJC18Q9H819 358 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 RIC8AQ9NPQ8 531 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 TNFRSF19Q9NS68 423 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 RAI14Q9P0K7 980 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 POLLQ9UGP5 575 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 HSF4Q9ULV5 492 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 VSIG4Q9Y279 399 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 AAR2Q9Y312 384 aaKnown RBP1.46□□□□□ -2.18
CCDC39-203ENST00000473854 CLIC4Q9Y696 253 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 SCINQ9Y6U3 715 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms