RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MRPL9Q9BYD2 267 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 ADNPQ9H2P0 1102 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 MMP27Q9H306 513 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 MMADHCQ9H3L0 296 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 PDZD7Q9H5P4 517 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 COPS7BQ9H9Q2 264 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 MOV10Q9HCE1 1003 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 EPB41L5Q9HCM4 733 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 RGS18Q9NS28 235 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 TMEM45AQ9NWC5 275 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 TMEM161AQ9NX61 479 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 TAS2R14Q9NYV8 317 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CISD1Q9NZ45 108 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 SELENONQ9NZV5 590 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 WDR35Q9P2L0 1181 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 DDX25Q9UHL0 483 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 SLC24A2Q9UI40 661 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 DBNLQ9UJU6 430 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 TTC7AQ9ULT0 858 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 PADI3Q9ULW8 664 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 PLAGL1Q9UM63 463 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 EXO1Q9UQ84 846 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 KNL1Q8NG31 2342 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 TP53BP1Q12888 1972 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 MYH7P12883 1935 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 FANCIQ9NVI1 1328 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 EDDM13A0A1B0GTR0 161 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 TCRBV21S2A2A0A5A6 115 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 BICDL2A1A5D9 508 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 CPED1A4D0V7 1026 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SPECC1L-ADORA2AF8WAN1 911 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 IFNL4K9M1U5 179 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 VCYO14598 125 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZNF263O14978 683 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 ADAMDEC1O15204 470 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SLC16A5O15375 505 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZBTB43O43298 467 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 GRID2O43424 1007 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 ITM2AO43736 263 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 TSPAN1O60635 241 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 RSL1D1O76021 490 aaKnown RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 NEURL1O76050 574 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 NDUFB10O96000 172 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PENKP01210 267 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 MMP2P08253 660 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 UNGP13051 313 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 PFKFB1P16118 471 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SRD5A1P18405 259 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 GNLYP22749 145 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 TCEA1P23193 301 aaKnown RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 FCARP24071 287 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 DNASE1P24855 282 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 GDI1P31150 447 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 MC5RP33032 325 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PCGF2P35227 344 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 AVPR1AP37288 418 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PRKCIP41743 596 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 TMPOP42166 694 aaKnown RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZNF75DP51815 510 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 CACNA2D1P54289 1103 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PNLIPRP2P54317 469 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 TAS2R40P59535 323 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SNAP25P60880 206 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 KRT83P78385 493 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 MRPS34P82930 218 aaKnown RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 PPP2R2BQ00005 443 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 YWHAHQ04917 246 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZNF91Q05481 1191 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PGM5Q15124 567 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PON2Q15165 354 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SHBQ15464 509 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SOWAHAQ2M3V2 549 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PCGF3Q3KNV8 242 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 KRTAP27-1Q3LI81 207 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 HSDL1Q3SXM5 330 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 EARS2Q5JPH6 523 aaKnown RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 C6orf10Q5SRN2 563 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 KRT79Q5XKE5 535 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 DHRS7BQ6IAN0 325 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZNF813Q6ZN06 617 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 CLEC17AQ6ZS10 378 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 CAMKMTQ7Z624 323 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 SDCCAG8Q86SQ7 713 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 NOXA1Q86UR1 476 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 AACSQ86V21 672 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZSCAN30Q86W11 494 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 RALGPS2Q86X27 583 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 FAM114A1Q8IWE2 563 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 PHC2Q8IXK0 858 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 DDIASQ8IXT1 998 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 MB21D2Q8IYB1 491 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 ZDHHC23Q8IYP9 409 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 FBXO39Q8N4B4 442 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 C10orf53Q8N6V4 93 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 C8orf58Q8NAV2 365 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 CAMKVQ8NCB2 501 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 HJURPQ8NCD3 748 aaPredicted RBP2.29□□□□□ -2.04
CALD1-216ENST00000473714 Q8NFD4 153 aa2.29□□□□□ -2.04
CALD1-216ENST00000473714 ENGASEQ8NFI3 743 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms