RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 IDSB3KWA1 339 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 AKR1B15C9JRZ8 316 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 ADAM10O14672 748 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 MAP2K7O14733 419 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 RASGRF2O14827 1237 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 P2RX6O15547 441 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 STATHP02808 62 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 SERPINA7P05543 415 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 PTMAP06454 111 aaKnown RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 COX6B1P14854 86 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 NR0B1P51843 470 aaKnown RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 CCZ1BP86790 482 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 CCZ1P86791 482 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 MAT1AQ00266 395 aaKnown RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 HSF1Q00613 529 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 GRM7Q14831 915 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 SF1Q15637 639 aaKnown RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 HKDC1Q2TB90 917 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 HIBCHQ6NVY1 386 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 DARS2Q6PI48 645 aaKnown RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 TMEM207Q6UWW9 146 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 CNGA4Q8IV77 575 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 CDKL3Q8IVW4 592 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 ZC3H7AQ8IWR0 971 aaKnown RBP9.14□□□□□ -0.95
MCF2L-223ENST00000473345 KBTBD2Q8IY47 623 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 FAM71DQ8N9W8 422 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 OR2L3Q8NG85 312 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 OR52K1Q8NGK4 314 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 COG1Q8WTW3 980 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 HDAC10Q969S8 669 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 MIEF2Q96C03 454 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 CCDC42Q96M95 316 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 SIGLEC12Q96PQ1 595 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 OSBPL8Q9BZF1 889 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 VPS37BQ9H9H4 285 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF304Q9HCX3 659 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 SEC14L3Q9UDX4 400 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 INTUQ9ULD6 942 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF835Q9Y2P0 537 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 CNTRLQ7Z7A1 2325 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 PKDREJQ9NTG1 2253 aa9.14□□□□□ -0.95
MCF2L-223ENST00000473345 TACC2O95359 2948 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 SETD2Q9BYW2 2564 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 LOC102723996A0A087X1L8 192 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 TRAV17A0A0B4J275 112 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 H0YGG7 62 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 SLC19A2O60779 497 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 SLCO2B1O94956 709 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 C1orf105O95561 183 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 S1PR4O95977 384 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 FTH1P02794 183 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 EIF2S1P05198 315 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 F7P08709 466 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 GSTM1P09488 218 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 AOAHP28039 575 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 CTNNA1P35221 906 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 ARF3P61204 181 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 GSTM4Q03013 218 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 ACVR1Q04771 509 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 SYTL3Q4VX76 610 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 ODF2Q5BJF6 829 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 DNAJC21Q5F1R6 531 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 RNFT1Q5M7Z0 435 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 C11orf63Q6NUN7 778 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 TMEM205Q6UW68 189 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 C3P1Q6ZMU1 363 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 LANCL3Q6ZV70 420 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 NEK10Q6ZWH5 1172 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 NDUFAF7Q7L592 441 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 PRSS41Q7RTY9 318 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 TMTC1Q8IUR5 882 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 DCUN1D3Q8IWE4 304 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 CCDC138Q96M89 665 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 LUC7LQ9NQ29 371 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 ANKRD10Q9NXR5 420 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 GALPQ9UBC7 116 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF282Q9UDV7 671 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 NXT1Q9UKK6 140 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 RUVBL1Q9Y265 456 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 ZKSCAN5Q9Y2L8 839 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 REXO2Q9Y3B8 237 aaKnown RBP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 PCDHA3Q9Y5H8 950 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 HRH3Q9Y5N1 445 aa9.13□□□□□ -0.95
MCF2L-223ENST00000473345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
MCF2L-223ENST00000473345 CCDC168Q8NDH2 2452 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 PRAMEF2O60811 474 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 USP1O94782 785 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 RASAL1O95294 804 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 BMP10O95393 424 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 OR56A5P0C7T3 313 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 PTPN7P35236 360 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 SLC26A3P40879 764 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 MAGEA1P43355 309 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 EMP2P54851 167 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 PRPSAP1Q14558 356 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 INAQ16352 499 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms