RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	PFKL	P17858	780 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	DGKA	P23743	735 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	HMGCL	P35914	325 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	RHOA	P61586	193 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	MRPS15	P82914	257 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	RTP2	Q5QGT7	225 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	LRRC8D	Q7L1W4	858 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	GALNT5	Q7Z7M9	940 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	C10orf111	Q8N326	155 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	CARNMT1	Q8N4J0	409 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	CHCHD4	Q8N4Q1	142 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	MKRN2	Q9H000	416 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	LATS2	Q9NRM7	1088 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	HCST	Q9UBK5	93 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	UGT2A1	Q9Y4X1	527 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	PLXNA4	Q9HCM2	1894 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	SAGE2P	A6NJ88	616 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	ARHGAP33	O14559	1287 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	NADK	O95544	446 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	ANGPTL1	O95841	491 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	CD160	O95971	181 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	CKB	P12277	381 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	BMP1	P13497	986 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	CD40LG	P29965	261 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	CA5A	P35218	305 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	PTGS2	P35354	604 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	NRIP1	P48552	1158 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	NKX2-5	P52952	324 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	RAPSN	Q13702	412 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	UBE2U	Q5VVX9	321 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	FAM122C	Q6P4D5	195 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	MBOAT1	Q6ZNC8	495 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	BTLA	Q7Z6A9	289 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	ANKRD46	Q86W74	232 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	C1orf109	Q9NX04	203 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	FCF1	Q9Y324	198 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	PRSS21	Q9Y6M0	314 aa		13.63	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF99	A8MXY4	864 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	SCAMP3	O14828	347 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	COCH	O43405	550 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CCNK	O75909	580 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	RECQL5	O94762	991 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	BCKDHA	P12694	445 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	FOSL1	P15407	271 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	EPB42	P16452	691 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	PCMT1	P22061	227 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CASP3	P42574	277 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF157	P51786	506 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	MBTPS1	Q14703	1052 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CXorf57	Q6NSI4	855 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CES5A	Q6NT32	575 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	HIPK1	Q86Z02	1210 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	RBFA	Q8N0V3	343 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	OR52E4	Q8NGH9	312 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	DEPDC7	Q96QD5	511 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	GABRQ	Q9UN88	632 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	MAU2	Q9Y6X3	613 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	NUP214	P35658	2090 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	FAM220BP	B1ANY3	271 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	MANBA	O00462	879 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	AXIN1	O15169	862 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	SHOX	O15266	292 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	MITF	O75030	526 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	STC2	O76061	302 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CYP4B1	P13584	511 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	EMX1	Q04741	257 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CDK5R2	Q13319	367 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	GTF2H3	Q13889	308 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	ARHGEF7	Q14155	803 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	LAPTM4A	Q15012	233 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CTF1	Q16619	201 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	RFX4	Q33E94	735 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	HECTD3	Q5T447	861 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	ATG9B	Q674R7	924 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	FUT10	Q6P4F1	479 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	CHST9	Q7L1S5	443 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	TRIM46	Q7Z4K8	759 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	SLCO6A1	Q86UG4	719 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	GALNT6	Q8NCL4	622 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	OR7A2P	Q8NGA2	310 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	OR6K2	Q8NGY2	324 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	MCOLN3	Q8TDD5	553 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	PYURF	Q96I23	114 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	TM6SF2	Q9BZW4	377 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	MAGIX	Q9H6Y5	334 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	ATP13A2	Q9NQ11	1180 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	LHX3	Q9UBR4	397 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	AP3M1	Q9Y2T2	418 aa		13.62	□□□□□ -0.23
ABCF3-210	ENST00000473311	UGT2B11	O75310	529 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ERN1	O75460	977 aa	Known RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	WDR47	O94967	919 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ARHGEF15	O94989	841 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	PTTG1	O95997	202 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	IGFBP5	P24593	272 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	FMO3	P31513	532 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms