RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 GMPRP36959 345 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 PCBP4P57723 403 aaKnown RBP19.99■□□□□ 0.79
TOP3A-204ENST00000472959 IRF9Q00978 393 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 NAA30Q147X3 362 aaPredicted RBP19.99■□□□□ 0.79
TOP3A-204ENST00000472959 GPR19Q15760 415 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 PRAMEF13Q5VWM6 474 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 TCAIMQ8N3R3 496 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 RHEBL1Q8TAI7 183 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 PMEPA1Q969W9 287 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 ZNF501Q96CX3 271 aaPredicted RBP19.99■□□□□ 0.79
TOP3A-204ENST00000472959 HAUS8Q9BT25 410 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 ALG9Q9H6U8 611 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 FAM60AQ9NP50 221 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 FOXJ2Q9P0K8 574 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 SNX7Q9UNH6 387 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 KLHL20Q9Y2M5 609 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 AKAP13Q12802 2813 aa19.99■□□□□ 0.79
TOP3A-204ENST00000472959 KERAO60938 352 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 ZXDCQ2QGD7 858 aaPredicted RBP19.98■□□□□ 0.79
TOP3A-204ENST00000472959 ZC3H12BQ5HYM0 836 aaKnown RBP19.98■□□□□ 0.79
TOP3A-204ENST00000472959 FCRL6Q6DN72 434 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 SULT1C3Q6IMI6 304 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 LCTLQ6UWM7 567 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 DNAJC22Q8N4W6 341 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 ACMSDQ8TDX5 336 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 N4BP2L2Q92802 583 aaPredicted RBP19.98■□□□□ 0.79
TOP3A-204ENST00000472959 RHBDF1Q96CC6 855 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 TSNARE1Q96NA8 513 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 DPH7Q9BTV6 452 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 ABCF3Q9NUQ8 709 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 SERTAD3Q9UJW9 196 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 PLCL2Q9UPR0 1127 aa19.98■□□□□ 0.79
TOP3A-204ENST00000472959 SYCE1LA8MT33 242 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.97■□□□□ 0.79
TOP3A-204ENST00000472959 CDH16O75309 829 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 RFPL1O75677 317 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 S100BP04271 92 aaPredicted RBP19.97■□□□□ 0.79
TOP3A-204ENST00000472959 RELAQ04206 551 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 TSNAXIP1Q2TAA8 658 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 LCA5Q86VQ0 697 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 PROSER1Q86XN7 944 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 ZNF248Q8NDW4 579 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 ALKBH8Q96BT7 664 aaKnown RBP19.97■□□□□ 0.79
TOP3A-204ENST00000472959 GPR78Q96P69 363 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 PLCD4Q9BRC7 762 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 SLC6A20Q9NP91 592 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 RRAGDQ9NQL2 400 aaPredicted RBP19.97■□□□□ 0.79
TOP3A-204ENST00000472959 CD274Q9NZQ7 290 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 TBK1Q9UHD2 729 aa19.97■□□□□ 0.79
TOP3A-204ENST00000472959 CHD8Q9HCK8 2581 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 OR2A25A4D2G3 310 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 TMEM150CB9EJG8 249 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 STMND1H3BQB6 276 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 TLX3O43711 291 aaPredicted RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 IPO13O94829 963 aaKnown RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 RBP1P09455 135 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 NPPBP16860 134 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 GGT5P36269 586 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 SLCO1A2P46721 670 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 GABRA4P48169 554 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 KCNC1P48547 511 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 IFFO1Q0D2I5 559 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 PTCHD3Q3KNS1 767 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 ZNF425Q6IV72 752 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 C17orf64Q86WR6 236 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 MCATQ8IVS2 390 aaKnown RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 KLHDC8AQ8IYD2 350 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 PDPRQ8NCN5 879 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 PYCR2Q96C36 320 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 CNTNAP3BQ96NU0 1288 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 ATOH8Q96SQ7 321 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 CNTNAP3Q9BZ76 1288 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 ROPN1BQ9BZX4 212 aaPredicted RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 SPRY4Q9C004 299 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 CNOT10Q9H9A5 744 aaKnown RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 ROPN1Q9HAT0 212 aaPredicted RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 EURLQ9NYK6 297 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 NUDT4Q9NZJ9 180 aa19.96■□□□□ 0.79
TOP3A-204ENST00000472959 TMEM184BQ9Y519 407 aaPredicted RBP19.96■□□□□ 0.79
TOP3A-204ENST00000472959 ACACBO00763 2458 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 IGKV1-8A0A0C4DH67 115 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 NCF1BA6NI72 391 aaPredicted RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 NCF1CA8MVU1 366 aaPredicted RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 ERLIN1O75477 346 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 STK17BO94768 372 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 MT-ND3P03897 115 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 NCF1P14598 390 aaPredicted RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 GLRBP48167 497 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 ITGA1P56199 1179 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 YBX1P67809 324 aaKnown RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 PWWP2BQ6NUJ5 590 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 PAQR7Q86WK9 346 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 GPR135Q8IZ08 494 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 PLD6Q8N2A8 252 aaKnown RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 RIBC1Q8N443 379 aaPredicted RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 OR1L3Q8NH93 324 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 EPS8L3Q8TE67 593 aaKnown RBP19.95■□□□□ 0.78
TOP3A-204ENST00000472959 MZB1Q8WU39 189 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 ULBP3Q9BZM4 244 aa19.95■□□□□ 0.78
TOP3A-204ENST00000472959 TMEM184CQ9NVA4 438 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms