RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CADM2Q8N3J6 435 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 CCNYQ8ND76 341 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 ZNF461Q8TAF7 563 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 DNAJB14Q8TBM8 379 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 SMARCD2Q92925 531 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 MAP6Q96JE9 813 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 CCDC115Q96NT0 180 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 B3GNT4Q9C0J1 378 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 FZD8Q9H461 694 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 GORASP2Q9H8Y8 452 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 SMURF2Q9HAU4 748 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 TNFRSF12AQ9NP84 129 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 C12orf4Q9NQ89 552 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 DNMT3LQ9UJW3 386 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 TSPAN16Q9UKR8 245 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 FZD10Q9ULW2 581 aa9.84□□□□□ -0.83
APTX-216ENST00000472896 GREB1Q4ZG55 1949 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 HEPACAM2A8MVW5 462 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 H3BMM5 538 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 TMEM189-UBE2V1I3L0A0 370 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 hCG_2039718K7EN88 272 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 IFRD1O00458 451 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 PRRG1O14668 218 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ZNF197O14709 1029 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 AIREO43918 545 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 NOS1APO75052 506 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 TRIM3O75382 744 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 B3GAT3O94766 335 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SLC4A1P02730 911 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 LRG1P02750 347 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SERPINF2P08697 491 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GOT1P17174 413 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GGT1P19440 569 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SPINK2P20155 84 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 EFNA1P20827 205 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 PTPN3P26045 913 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PIGAP37287 484 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MAP2K4P45985 399 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SLC15A1P46059 708 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PPP3CCP48454 512 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MASP1P48740 699 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PXNP49023 591 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 CDH13P55290 713 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ARPP19P56211 112 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ORC1Q13415 861 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SLC14A2Q15849 920 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 RABL3Q5HYI8 236 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 TOR1AIP1Q5JTV8 583 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ZNF678Q5SXM1 525 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 CERCAMQ5T4B2 595 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 NDUFAF5Q5TEU4 345 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PIK3R6Q5UE93 754 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 JADE1Q6IE81 842 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PKN3Q6P5Z2 889 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GLRX5Q86SX6 157 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MFSD6LQ8IWD5 586 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MICU2Q8IYU8 434 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 KDF1Q8NAX2 398 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 NCLNQ969V3 563 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ISG20Q96AZ6 181 aaKnown RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 PDLIM5Q96HC4 596 aaKnown RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 PIWIL1Q96J94 861 aaKnown RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 LRRC3BQ96PB8 259 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 C6orf62Q9GZU0 229 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 MAGIXQ9H6Y5 334 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GOLGA2P5Q9HBQ8 144 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 B3GNT2Q9NY97 397 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 WASF3Q9UPY6 502 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 AP3M1Q9Y2T2 418 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GPR45Q9Y5Y3 372 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ATP6AP2A0A1C7CYW4 349 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 KRT87PA6NCN2 255 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SLC38A8A6NNN8 435 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GNGT2O14610 69 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 STX7O15400 261 aaKnown RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 ZNF780AO75290 641 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 CST1P01037 141 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MT-ND1P03886 318 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MT-ND2P03891 347 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ARSAP15289 507 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PAMP19021 973 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 HOXA6P31267 233 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 NOS2P35228 1153 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 IL12RB1P42701 662 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 CTSKP43235 329 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 TAS2R39P59534 338 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SEMA3BQ13214 749 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 TRIP4Q15650 581 aaPredicted RBP9.83□□□□□ -0.84
APTX-216ENST00000472896 UPP1Q16831 310 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 GOLGA7BQ2TAP0 167 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PLA2G4EQ3MJ16 856 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PKDCCQ504Y2 493 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PLA2G2CQ5R387 149 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 KANK2Q63ZY3 851 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 SLC8B1Q6J4K2 584 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 PSAPL1Q6NUJ1 521 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 UNQ6494/PRO21346Q6UXR6 183 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 ANKS3Q6ZW76 656 aa9.83□□□□□ -0.84
APTX-216ENST00000472896 CREB3L2Q70SY1 520 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms