RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 A0A087X1B8 175 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 OR2A25A4D2G3 310 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 E7EQ34 232 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CPNE3O75131 537 aaKnown RBP14.68□□□□□ -0.06
SDC3-203ENST00000471567 KRT38O76015 456 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 ANXA5P08758 320 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 HBQ1P09105 142 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CCNYL3P0C7X3 344 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 SLC35E2BP0CK96 405 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 MYBL2P10244 700 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CD1DP15813 335 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CNTFP26441 200 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CSRP3P50461 194 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 TBPL1P62380 186 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 NAE1Q13564 534 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 TSNQ15631 228 aaKnown RBP14.68□□□□□ -0.06
SDC3-203ENST00000471567 CDKL4Q5MAI5 379 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 MANEAQ5SRI9 462 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 THEMIS2Q5TEJ8 643 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 PRAMEF13Q5VWM6 474 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CAPN13Q6MZZ7 669 aaPredicted RBP14.68□□□□□ -0.06
SDC3-203ENST00000471567 TLDC1Q6P9B6 456 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 MBOAT1Q6ZNC8 495 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 CMC1Q7Z7K0 106 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 TBC1D1Q86TI0 1168 aaPredicted RBP14.68□□□□□ -0.06
SDC3-203ENST00000471567 MCATQ8IVS2 390 aaKnown RBP14.68□□□□□ -0.06
SDC3-203ENST00000471567 CNPY4Q8N129 248 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 IL22RA1Q8N6P7 574 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 GALNT6Q8NCL4 622 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 OR56A3Q8NH54 315 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 LRFN5Q96NI6 719 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 SGPP1Q9BX95 441 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 ATG10Q9H0Y0 220 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 NMRAL1Q9HBL8 299 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 SLC6A20Q9NP91 592 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 TLK1Q9UKI8 766 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 PADI1Q9ULC6 663 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 ACOT9Q9Y305 439 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 AP1M2Q9Y6Q5 423 aa14.68□□□□□ -0.06
SDC3-203ENST00000471567 EXOC1LA0A1B0GW35 172 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 CCDC189A1A4V9 331 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 POC1B-GALNT4F8VUJ3 575 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 H3BMH7 237 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 HCRTR1O43613 425 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 SRPX2O60687 465 aaPredicted RBP14.67□□□□□ -0.06
SDC3-203ENST00000471567 OR2B3O76000 313 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 GUCA1CO95843 209 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 NTRK1P04629 796 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 C2P06681 752 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 LTA4HP09960 611 aaKnown RBP14.67□□□□□ -0.06
SDC3-203ENST00000471567 HNMTP50135 292 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 SERPINB8P50452 374 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 TMPRSS3P57727 454 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 BMPR2Q13873 1038 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 CSHL1Q14406 222 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 DEFB110Q30KQ9 67 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 TCTE1Q5JU00 501 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 ZNF425Q6IV72 752 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 LCTLQ6UWM7 567 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 FRA10AC1Q70Z53 315 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 PAQR7Q86WK9 346 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 GSPT2Q8IYD1 628 aaKnown RBP14.67□□□□□ -0.06
SDC3-203ENST00000471567 UHMK1Q8TAS1 419 aaKnown RBP14.67□□□□□ -0.06
SDC3-203ENST00000471567 DCAKDQ8WVC6 231 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 KIAA1191Q96A73 305 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 MED8Q96G25 268 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 ZNF285Q96NJ3 590 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 HAUS8Q9BT25 410 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 EFHD1Q9BUP0 239 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 ACTR5Q9H9F9 607 aaPredicted RBP14.67□□□□□ -0.06
SDC3-203ENST00000471567 SNX15Q9NRS6 342 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 FETUBQ9UGM5 382 aa14.67□□□□□ -0.06
SDC3-203ENST00000471567 PKD1L2Q7Z442 2459 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 ANKRD12Q6UB98 2062 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 IGKV1-8A0A0C4DH67 115 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 TEX51A0A1B0GUA7 166 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 CTSVO60911 334 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 KLK3P07288 261 aaPredicted RBP14.66□□□□□ -0.06
SDC3-203ENST00000471567 NPPBP16860 134 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 TYK2P29597 1187 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 STAT5AP42229 794 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 YBX1P67809 324 aaKnown RBP14.66□□□□□ -0.06
SDC3-203ENST00000471567 SLC29A2Q14542 456 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 TGFBIQ15582 683 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 ZXDCQ2QGD7 858 aaPredicted RBP14.66□□□□□ -0.06
SDC3-203ENST00000471567 TAF1BQ53T94 588 aaPredicted RBP14.66□□□□□ -0.06
SDC3-203ENST00000471567 LGSNQ5TDP6 509 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 FBXO42Q6P3S6 717 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 CCDC81Q6ZN84 652 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 RNF44Q7L0R7 432 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 C17orf64Q86WR6 236 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 GPSM1Q86YR5 675 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 SPATA6LQ8N4H0 392 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 STAG3L4Q8TBR4 150 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 ISL2Q96A47 359 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 KIAA1143Q96AT1 154 aaPredicted RBP14.66□□□□□ -0.06
SDC3-203ENST00000471567 EGFL8Q99944 293 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 ZFYVE21Q9BQ24 234 aa14.66□□□□□ -0.06
SDC3-203ENST00000471567 CCDC77Q9BR77 488 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms