RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MYCBPQ99417 103 aaPredicted RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 NAP1L3Q99457 506 aaPredicted RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 TRAF4Q9BUZ4 470 aaPredicted RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 SLC39A8Q9C0K1 460 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 ZNF701Q9NV72 531 aaPredicted RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 ZNF224Q9NZL3 707 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 RUVBL2Q9Y230 463 aaKnown RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 AP1M2Q9Y6Q5 423 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 A0A0G2JNG1 304 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TRBV2A0A0J9YWF9 115 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 SNX3O60493 162 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TRIM16O95361 564 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 IFNB1P01574 187 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 HEXBP07686 556 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 UGT1A6P19224 532 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 THOP1P52888 689 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 GMFBP60983 142 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 MYBPHQ13203 477 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 GAMTQ14353 236 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 KIR2DS5Q14953 304 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TAF7Q15545 349 aaPredicted RBP6.21□□□□□ -1.42
SMC5-202ENST00000471372 MORN5Q5VZ52 161 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 PM20D1Q6GTS8 502 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TRNP1Q6NT89 227 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 SIGLEC15Q6ZMC9 328 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 IL17RELQ6ZVW7 336 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 MCM10Q7L590 875 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 ADAMTSL2Q86TH1 951 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 ADCK1Q86TW2 530 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 SATL1Q86VE3 508 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 CROCCP3Q8IVE0 287 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 BATF2Q8N1L9 274 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 ZNF114Q8NC26 417 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TMEM186Q96B77 213 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 MRPL38Q96DV4 380 aaKnown RBP6.21□□□□□ -1.42
SMC5-202ENST00000471372 C1QTNF7Q9BXJ2 289 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TEX13AQ9BXU3 409 aaPredicted RBP6.21□□□□□ -1.42
SMC5-202ENST00000471372 CARD9Q9H257 536 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 MRPL17Q9NRX2 175 aaKnown RBP6.21□□□□□ -1.42
SMC5-202ENST00000471372 PKD2L2Q9NZM6 624 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 TBK1Q9UHD2 729 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 AURKCQ9UQB9 309 aa6.21□□□□□ -1.42
SMC5-202ENST00000471372 A0A087X0K7 114 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 A0A1W2PRB8 838 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 ZNF587BE7ETH6 402 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 RNASEH1O60930 286 aaKnown RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 MT-ATP6P00846 226 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 PDGFBP01127 241 aaPredicted RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 SP9P0CG40 484 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 PSG1P11464 419 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 HLA-DOBP13765 273 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 SSTR1P30872 391 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 TKTL1P51854 596 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 PDX1P52945 283 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 RELQ04864 619 aaPredicted RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 EEF1A2Q05639 463 aaKnown RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 SULT2A1Q06520 285 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 NFATC4Q14934 902 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 SRSF7Q16629 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMC5-202ENST00000471372 WSCD2Q2TBF2 565 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 CYP4A22Q5TCH4 519 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 ZNF770Q6IQ21 691 aaPredicted RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 C8orf82Q6P1X6 216 aaPredicted RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 NEK5Q6P3R8 708 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 ABRAXAS1Q6UWZ7 409 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 NUDT13Q86X67 352 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 ADHFE1Q8IWW8 467 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 LGI2Q8N0V4 545 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 KDM8Q8N371 416 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 RBMXL3Q8N7X1 1067 aaKnown RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 NRACQ8N912 160 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 ZNF540Q8NDQ6 660 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 OR10Q1Q8NGQ4 319 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 SAP25Q8TEE9 199 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 SAMD8Q96LT4 415 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 DDX50Q9BQ39 737 aaKnown RBP6.2□□□□□ -1.42
SMC5-202ENST00000471372 C17orf62Q9BQA9 187 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 CCDC3Q9BQI4 270 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 NEURL2Q9BR09 285 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 ZNF577Q9BSK1 485 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 IDI2Q9BXS1 227 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 PELI2Q9HAT8 420 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 MAGEF1Q9HAY2 307 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMC5-202ENST00000471372 SMARCAL1Q9NZC9 954 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 NUDCQ9Y266 331 aa6.2□□□□□ -1.42
SMC5-202ENST00000471372 A0A0B4J203 849 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 FAM149AA5PLN7 773 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 SKILP12757 684 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 AREGP15514 252 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 DGKAP23743 735 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 SRP54P61011 504 aaKnown RBP6.19□□□□□ -1.42
SMC5-202ENST00000471372 RPS18P62269 152 aaKnown RBP6.19□□□□□ -1.42
SMC5-202ENST00000471372 SSBP2P81877 361 aaPredicted RBP6.19□□□□□ -1.42
SMC5-202ENST00000471372 IL10RBQ08334 325 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 MFAP5Q13361 173 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 STXBP2Q15833 593 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 INAQ16352 499 aa6.19□□□□□ -1.42
SMC5-202ENST00000471372 TAF1BQ53T94 588 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms