RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 C16orf89Q6UX73 402 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 DCP2Q8IU60 420 aaKnown RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS52-216ENST00000471309 LAS2Q8IYD9 372 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 FRMD1Q8N878 549 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 KYQ8NBH2 561 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 OR9I1Q8NGQ6 314 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RLN3Q8WXF3 142 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 UBE2E3Q969T4 207 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 TSACCQ96A04 125 aaPredicted RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 RCN3Q96D15 328 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 METTL2AQ96IZ6 378 aaKnown RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 SPACA7Q96KW9 195 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 CAMK1GQ96NX5 476 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 FERD3LQ96RJ6 166 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 C1orf50Q9BV19 199 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 EFCAB1Q9HAE3 211 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 BRF2Q9HAW0 419 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 LRTM1Q9HBL6 345 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 PRDM8Q9NQV8 689 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 C1orf109Q9NX04 203 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 TBC1D29Q9UFV1 150 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 MUTYHQ9UIF7 546 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 PNMA8BQ9ULN7 279 aaPredicted RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 SH2B3Q9UQQ2 575 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 EIF3LQ9Y262 564 aaKnown RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 TMED5Q9Y3A6 229 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 SIT1Q9Y3P8 196 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 TSC22D4Q9Y3Q8 395 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 POLR3HQ9Y535 204 aaPredicted RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 A0A1W2PPV9 198 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 PIPSLA2A3N6 862 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 DYTNA2CJ06 578 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 OR52A4PA6NMU1 304 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 K7ESF4 209 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 NR5A2O00482 541 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 ANKRD28O15084 1053 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SCAMP1O15126 338 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SLC22A3O75751 556 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 TNFP01375 233 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 F3P13726 295 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SLC2A4P14672 509 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 JAK1P23458 1154 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 VARSP26640 1264 aaKnown RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 MAPK1P28482 360 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 PGM1P36871 562 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 ACTR1BP42025 376 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 CXCL12P48061 93 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 ACTR1AP61163 376 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SLC25A3Q00325 362 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 HMGCS1Q01581 520 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 EIF2B5Q13144 721 aaKnown RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 TSTA3Q13630 321 aaPredicted RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 FZD2Q14332 565 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SLBPQ14493 270 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS52-216ENST00000471309 KRT33BQ14525 404 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 KIAA0040Q15053 153 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 RFTN2Q52LD8 501 aaPredicted RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 CATSPEREQ5SY80 951 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 THEMIS2Q5TEJ8 643 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 CACHD1Q5VU97 1274 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 IL23RQ5VWK5 629 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 REP15Q6BDI9 236 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 CYB5D1Q6P9G0 228 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 PAOXQ6QHF9 649 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 BLOC1S3Q6QNY0 202 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 CYP20A1Q6UW02 462 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 NXPE4Q6UWF7 544 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SUSD1Q6UWL2 747 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 HACD2Q6Y1H2 254 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SLC36A4Q6YBV0 504 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 MAMSTRQ6ZN01 415 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 RD3Q7Z3Z2 195 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 IQCHQ86VS3 1027 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 PARGQ86W56 976 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 C17orf64Q86WR6 236 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 HID1Q8IV36 788 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 FUNDC1Q8IVP5 155 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 FAM9CQ8IZT9 166 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 PGAM4Q8N0Y7 254 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 OR52E1Q8NGJ3 308 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 OR2L8Q8NGY9 312 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 GPBAR1Q8TDU6 330 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SNX19Q92543 992 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 CMTM7Q96FZ5 175 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 KLHDC7BQ96G42 594 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 FCRL1Q96LA6 429 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SLC6A18Q96N87 628 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 MRPL1Q9BYD6 325 aaKnown RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 GSDMCQ9BYG8 508 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 TMEM168Q9H0V1 697 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 KIR3DX1Q9H7L2 352 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 PELI2Q9HAT8 420 aa9.06□□□□□ -0.96
VPS52-216ENST00000471309 SPATA6Q9NWH7 488 aaPredicted RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 GEMIN8Q9NWZ8 242 aaKnown RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 SCHIP1Q9P0W5 487 aaPredicted RBP9.06□□□□□ -0.96
VPS52-216ENST00000471309 PRPF19Q9UMS4 504 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms