RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 HACL1Q9UJ83 578 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 LAMA4Q16363 1823 aa4.97□□□□□ -1.61
CCDC39-202ENST00000471307 CNTNAP1P78357 1384 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 SCN4AP35499 1836 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 TSPY2A6NKD2 308 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 PLK4O00444 970 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 SH2B2O14492 632 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 IFIT3O14879 490 aaKnown RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 RANBP6O60518 1105 aaKnown RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 GCNT3O95395 438 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 NADKO95544 446 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 SCGB1D1O95968 90 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 CEACAM1P13688 526 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 EPHX2P34913 555 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 ARL3P36405 182 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 MAP2K2P36507 400 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 CLNS1AP54105 237 aaKnown RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 ASTE1Q2TB18 679 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 TATDN1Q6P1N9 297 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 ARID3BQ8IVW6 561 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 DCPSQ96C86 337 aaKnown RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 DYNLL2Q96FJ2 89 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 ZNF274Q96GC6 653 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-202ENST00000471307 UBAC1Q9BSL1 405 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 DEFB129Q9H1M3 183 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 KAT14Q9H8E8 782 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 MIOSQ9NXC5 875 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 DNAJB4Q9UDY4 337 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 CMAHPQ9Y471 501 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 TIAM2Q8IVF5 1701 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 NAV1Q8NEY1 1877 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 ADAMTSL1Q8N6G6 1762 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 NEDD4P46934 1319 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 STK36Q9NRP7 1315 aa4.96□□□□□ -1.62
CCDC39-202ENST00000471307 UTRNP46939 3433 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 A0A087X002 238 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CCDC69A6NI79 296 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 MYO1GB0I1T2 1018 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 NDUFS4O43181 175 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 PRDM1O75626 825 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 TBX18O95935 607 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 TSPY3P0CV98 308 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 TSPY8P0CW00 308 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CKMT2P17540 419 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 COPB2P35606 906 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 THOP1P52888 689 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 RPS18P62269 152 aaKnown RBP4.95□□□□□ -1.62
CCDC39-202ENST00000471307 MPP1Q00013 466 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CUL4AQ13619 759 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CRYMQ14894 314 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 WTAPQ15007 396 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 KLC3Q6P597 504 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CFAP161Q6P656 301 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 KLHL35Q6PF15 583 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CHST3Q7LGC8 479 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 MCEMP1Q8IX19 187 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 SEMA4DQ92854 862 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 CCDC34Q96HJ3 373 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 LINC00479Q96M42 142 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 RTP3Q9BQQ7 232 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 WDR13Q9H1Z4 485 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 PLK3Q9H4B4 646 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 LY9Q9HBG7 655 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 OLFML3Q9NRN5 406 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 ORC3Q9UBD5 711 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-202ENST00000471307 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.95□□□□□ -1.62
CCDC39-202ENST00000471307 LAMB1P07942 1786 aa4.95□□□□□ -1.62
CCDC39-202ENST00000471307 DDX60LQ5H9U9 1706 aaKnown RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 MYH8P13535 1937 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 IGKV6D-41A0A0C4DH26 115 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 KLF18A0A0U1RQI7 1052 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 MEIOCA2RUB1 952 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 F5H0A9 414 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 K7ENM7 598 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 PFKFB2O60825 505 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 CALM1P0DP23 149 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 CALM2P0DP24 149 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 CALM3P0DP25 149 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 PPARGP37231 505 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 NOVP48745 357 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 CAMPP49913 170 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 DENND5BQ6ZUT9 1274 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 TMEM179Q6ZVK1 233 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 STXBP4Q6ZWJ1 553 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 DBF4BQ8NFT6 615 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 ZNF653Q96CK0 615 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 GIMAP5Q96F15 307 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 TCEANC2Q96MN5 208 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 CMTM3Q96MX0 182 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 LLPHQ9BRT6 129 aaKnown RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 LRRC2Q9BYS8 371 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 OLA1Q9NTK5 396 aaKnown RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 BARHL2Q9NY43 387 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 PTTG2Q9NZH5 202 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 NYAP2Q9P242 653 aa4.94□□□□□ -1.62
CCDC39-202ENST00000471307 CORO1CQ9ULV4 474 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-202ENST00000471307 SLC7A7Q9UM01 511 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms