RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PKMP14618 531 aaKnown RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 CHRM3P20309 590 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 LSP1P33241 339 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 HSD17B2P37059 387 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 GCGRP47871 477 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 DR1Q01658 176 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 ANKRD20A4Q4UJ75 823 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 MLIPQ5VWP3 458 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 DUPD1Q68J44 220 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 MRPL14Q6P1L8 145 aaKnown RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 ZNF655Q8N720 491 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 CALML6Q8TD86 181 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 PTERQ96BW5 349 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 FER1L6-AS2Q96M78 137 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 SERPINB12Q96P63 405 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 IL17FQ96PD4 163 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 ERP44Q9BS26 406 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 IL1RAPL1Q9NZN1 696 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 MTRF1LQ9UGC7 380 aaKnown RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 NEU2Q9Y3R4 380 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 MED13Q9UHV7 2174 aa12.96□□□□□ -0.34
HMGN1-211ENST00000471260 SNRNP200O75643 2136 aaKnown RBP12.95□□□□□ -0.34
HMGN1-211ENST00000471260 MYO18BQ8IUG5 2567 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 A0A1B0GX78 115 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 E5RI56 91 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 GOLGA8TH3BQL2 631 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 NDUFAB1O14561 156 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 NIPSNAP2O75323 286 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 USP1O94782 785 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 FAM107AO95990 144 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 ALBP02768 609 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 MDH1P40925 334 aaKnown RBP12.95□□□□□ -0.34
HMGN1-211ENST00000471260 FOLR3P41439 243 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 MAGEA3P43357 314 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 ZNF844Q08AG5 666 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 THOC5Q13769 683 aaKnown RBP12.95□□□□□ -0.34
HMGN1-211ENST00000471260 GRM7Q14831 915 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 ARHGAP19Q14CB8 494 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 UAP1Q16222 522 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-211ENST00000471260 CYP2A13Q16696 494 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 FAM214AQ32MH5 1076 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 NKAIN1Q4KMZ8 207 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 ANKRD22Q5VYY1 191 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 CPZQ66K79 652 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 FCRL6Q6DN72 434 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 NEK10Q6ZWH5 1172 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 CENPUQ71F23 418 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-211ENST00000471260 NAT8LQ8N9F0 302 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 OR2Y1Q8NGV0 311 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 FKBP10Q96AY3 582 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 ZNF285Q96NJ3 590 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 TMEM109Q9BVC6 243 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
HMGN1-211ENST00000471260 COMMD10Q9Y6G5 202 aa12.95□□□□□ -0.34
HMGN1-211ENST00000471260 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 FITM1A5D6W6 292 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 ZNF839A8K0R7 811 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 PEX12O00623 359 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 DSCR3O14972 297 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 TTI1O43156 1089 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 DPM1O60762 260 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 PSIP1O75475 530 aaKnown RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 CATP04040 527 aaKnown RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 PDGFAP04085 211 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 ERGP11308 486 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 ALAS2P22557 587 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 GRIA3P42263 894 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 BDKRB1P46663 353 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 CD97P48960 835 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 CHAF1BQ13112 559 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 LONRF1Q17RB8 773 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 KLHL38Q2WGJ6 581 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 TTLL9Q3SXZ7 439 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 C1orf189Q5VU69 101 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 FAM20CQ8IXL6 584 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 TTC29Q8NA56 475 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 FBXO15Q8NCQ5 510 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 OR2L3Q8NG85 312 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 OR2A1Q8NGT9 310 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 OR9A1PQ8NGU1 263 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 GABPB2Q8TAK5 448 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 KCNJ9Q92806 393 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 MIB2Q96AX9 1013 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 ZNF669Q96BR6 464 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 SMAD5Q99717 465 aaKnown RBP12.94□□□□□ -0.34
HMGN1-211ENST00000471260 SELENOSQ9BQE4 189 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 CCDC68Q9H2F9 335 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 C5AR2Q9P296 337 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 ANKMY1Q9P2S6 941 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 KLHL20Q9Y2M5 609 aa12.94□□□□□ -0.34
HMGN1-211ENST00000471260 PTRH2Q9Y3E5 179 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms