RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SLC45A3Q96JT2 553 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SFXN2Q96NB2 322 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 AGAP4Q96P64 663 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SPAG5Q96R06 1193 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 GAL3ST4Q96RP7 486 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SEPHS2Q99611 448 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 BARD1Q99728 777 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NKX3-1Q99801 234 aaPredicted RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 TEX12Q9BXU0 123 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 MRPL1Q9BYD6 325 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PANK2Q9BZ23 570 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NYXQ9GZU5 481 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 FAM49AQ9H0Q0 323 aaPredicted RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 WNT5BQ9H1J7 359 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 GHITMQ9H3K2 345 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 OPA3Q9H6K4 179 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CHST11Q9NPF2 352 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 BLOC1S4Q9NUP1 217 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 STK26Q9P289 416 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 VPS28Q9UK41 221 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 RARRES3Q9UL19 164 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 ABT1Q9ULW3 272 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PADI2Q9Y2J8 665 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 WIPI2Q9Y4P8 454 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 R4GN57 208 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 ATRXP46100 2492 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 hCG_1807616A0A1W2PRN6 198 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 NEMP2A6NFY4 417 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 ACOD1A6NK06 481 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 GLOD5A6NK44 160 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 ASB14A6NK59 587 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 A8MV72 311 aaPredicted RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SNURFLB1AK76 121 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SRRM5B3KS81 715 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 G3V2L1 256 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 H0YAE9 185 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TEX28O15482 410 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 BCL2L11O43521 198 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TSPAN9O75954 239 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 RAB40ALP0C0E4 278 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 DNAH10OSP0CZ25 163 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 THEGLP0DJG4 465 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 RPL35AP18077 110 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 ITIH1P19827 911 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SAT1P21673 171 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 PAX3P23760 479 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 CD27P26842 260 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 OXTRP30559 389 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 PTGER4P35408 488 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 EIF2DP41214 584 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MTHFRP42898 656 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 DNA2P51530 1060 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MAPK12P53778 367 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 NAP1L1P55209 391 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 KLC1Q07866 573 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 BAATQ14032 418 aaPredicted RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TMEM132DQ14C87 1099 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 WTAPQ15007 396 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TAB1Q15750 504 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 EXT1Q16394 746 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SNAPC1Q16533 368 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MEA1Q16626 185 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MTHFSDQ2M296 383 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SLC25A30Q5SVS4 291 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 PRR27Q6MZM9 219 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MFSD12Q6NUT3 480 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 GDPGP1Q6ZNW5 385 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 Q6ZR54 194 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 HPS6Q86YV9 775 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 LGI2Q8N0V4 545 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TAGAPQ8N103 731 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SLC39A11Q8N1S5 342 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 METTL4Q8N3J2 472 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 APPL2Q8NEU8 664 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 CFAP61Q8NHU2 1237 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 LRRC15Q8TF66 581 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 CHPT1Q8WUD6 406 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 JAKMIP2Q96AA8 810 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 NXNL1Q96CM4 212 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 EVI5LQ96CN4 794 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 CNRIP1Q96F85 164 aaPredicted RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 ATXN7L3BQ96GX2 97 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 FAM218AQ96MZ4 157 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 LGMNQ99538 433 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 LPAR4Q99677 370 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 NAP1L4Q99733 375 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MAP3K3Q99759 626 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 CCDC3Q9BQI4 270 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 SDF4Q9BRK5 362 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 RPP25Q9BUL9 199 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TDRD1Q9BXT4 1180 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 PUS3Q9BZE2 481 aaKnown RBP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MTMR12Q9C0I1 747 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TLE6Q9H808 572 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 Q9H8V8 135 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 GNB4Q9HAV0 340 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 TRPV4Q9HBA0 871 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 MYNNQ9NPC7 610 aa1.16□□□□□ -2.22
UBXN4-207ENST00000471246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.16□□□□□ -2.22
UBXN4-207ENST00000471246 GIMAP4Q9NUV9 329 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms