RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PTCD3Q96EY7 689 aaKnown RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 NSL1Q96IY1 281 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 WDR92Q96MX6 357 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 RAB3IPQ96QF0 476 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 MIPEPQ99797 713 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TMEM79Q9BSE2 394 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 CCDC106Q9BWC9 280 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 NUF2Q9BZD4 464 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 C6orf106Q9H6K1 298 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 MVB12BQ9H7P6 319 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 IPPKQ9H8X2 491 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ZBTB26Q9HCK0 441 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 CD93Q9NPY3 652 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 MBNL1Q9NR56 388 aaKnown RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 GPR27Q9NS67 375 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TRNAU1APQ9NX07 287 aaKnown RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ASIC5Q9NY37 505 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TAGLN3Q9UI15 199 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ADAMTS6Q9UKP5 1117 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PPT2Q9UMR5 302 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 SNX6Q9UNH7 406 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TSC22D4Q9Y3Q8 395 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 DNAJC15Q9Y5T4 150 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 AK5Q9Y6K8 562 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 DGKBQ9Y6T7 804 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 GCN1Q92616 2671 aaKnown RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PTPRBP23467 1997 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 NCF1BA6NI72 391 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 NCF1CA8MVU1 366 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 H0Y8X5 98 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SLC28A1O00337 649 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 TAPBPO15533 448 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CLDN9O95484 217 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CEACAM5P06731 702 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 THRAP10827 490 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 HGFP14210 728 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 NCF1P14598 390 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SLC2A4P14672 509 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 IDO1P14902 403 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 GNAZP19086 355 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 IDSP22304 550 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 PRPH2P23942 346 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 GSTM2P28161 218 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 PTPN4P29074 926 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 EIF2S3P41091 472 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 RXRGP48443 463 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 AGTR2P50052 363 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 UCNP55089 124 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 STX1BP61266 288 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CYP2A13Q16696 494 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 LSM12Q3MHD2 195 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SLC9B1Q4ZJI4 515 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 PYCR3Q53H96 274 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CCDC157Q569K6 752 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 COQ5Q5HYK3 327 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CAPN13Q6MZZ7 669 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 DHRS13Q6UX07 377 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 XKR5Q6UX68 686 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 LARP4Q71RC2 724 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 ASRGL1Q7L266 308 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 GPR155Q7Z3F1 870 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 MILR1Q7Z6M3 343 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 ZNF605Q86T29 641 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SYVN1Q86TM6 617 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 VRK3Q8IV63 474 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CFAP206Q8IYR0 622 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SDR16C5Q8N3Y7 309 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 TEX9Q8N6V9 391 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 RP9Q8TA86 221 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 MAPK15Q8TD08 544 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 UBE2E3Q969T4 207 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 REPS1Q96D71 796 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 ERLEC1Q96DZ1 483 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 WDR34Q96EX3 536 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 WBP1Q96G27 269 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 CNDP2Q96KP4 475 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 PPP3R2Q96LZ3 170 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 DCBLD2Q96PD2 775 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 OR2M4Q96R27 311 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 EBF4Q9BQW3 602 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 HAUS8Q9BT25 410 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SGPP1Q9BX95 441 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 RASSF4Q9H2L5 321 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 TRIT1Q9H3H1 467 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 NOL11Q9H8H0 719 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 KLC4Q9NSK0 619 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 UTP6Q9NYH9 597 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 STOX2Q9P2F5 926 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 TMED5Q9Y3A6 229 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 RRP15Q9Y3B9 282 aaKnown RBP8.87□□□□□ -0.99
PTPRE-207ENST00000471218 KCNE2Q9Y6J6 123 aa8.87□□□□□ -0.99
PTPRE-207ENST00000471218 PIKFYVEQ9Y2I7 2098 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 PRSS38A1L453 326 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 TMEM202A6NGA9 273 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 BBIP1A8MTZ0 92 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 H0YIV9 168 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 OR7A17O14581 309 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 UBDO15205 165 aa8.86□□□□□ -0.99
PTPRE-207ENST00000471218 CCNT2O60583 730 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms