RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PPP6CO00743 305 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 MAP3K7O43318 606 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 RGS14O43566 566 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 CCDC22O60826 627 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 CHRM5P08912 532 aaPredicted RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 C1GALT1C1LP0DN25 315 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 JUPP14923 745 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 NPPBP16860 134 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 ARRB2P32121 409 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 FASLGP48023 281 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 MAZP56270 477 aaKnown RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 ERVPABLB-1P60509 514 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 PRDX1Q06830 199 aaKnown RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 BNIP3Q12983 259 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 TRAF3Q13114 568 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 TBCCQ15814 346 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 GGTA1PQ4G0N0 100 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 C10orf62Q5T681 223 aaPredicted RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 ATG9BQ674R7 924 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 ZCCHC8Q6NZY4 707 aaKnown RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 LETMD1Q6P1Q0 360 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 MED27Q6P2C8 311 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 NXPE4Q6UWF7 544 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 ARL14Q8N4G2 192 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 L3MBTL4Q8NA19 623 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 OR6C4Q8NGE1 309 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 SELENOMQ8WWX9 145 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 PATE1Q8WXA2 126 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 JPH3Q8WXH2 748 aaPredicted RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 NEIL2Q969S2 332 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 PPP1R36Q96LQ0 422 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 AIF1LQ9BQI0 150 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 UCK1Q9HA47 277 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 PELI2Q9HAT8 420 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 CAPN10Q9HC96 672 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 MRPS30Q9NP92 439 aaKnown RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 TCF7L2Q9NQB0 619 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 NMRK1Q9NWW6 199 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.43□□□□□ -0.9
CCM2-204ENST00000470837 RNF11Q9Y3C5 154 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 TIMM22Q9Y584 194 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 PLXND1Q9Y4D7 1925 aa9.43□□□□□ -0.9
CCM2-204ENST00000470837 PRAMEF33A0A0G2JMD5 474 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 SLC28A1O00337 649 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 EBAG9O00559 213 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 FFAR3O14843 346 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 PIP5K1BO14986 540 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 GPR42O15529 346 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 UBXN7O94888 489 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 FKBP9O95302 570 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 RETP07949 1114 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 PCNAP12004 261 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 CDH1P12830 882 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ALOX15P16050 662 aaPredicted RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 POLR2CP19387 275 aaPredicted RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 SERPINB3P29508 390 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 PRDX3P30048 256 aaKnown RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 CASP2P42575 452 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 IDH3AP50213 366 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 BTKQ06187 659 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ZNF33BQ06732 778 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 DOC2AQ14183 400 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 SLBPQ14493 270 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCM2-204ENST00000470837 RBBP5Q15291 538 aaKnown RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 NR0B2Q15466 257 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ZRSR2Q15696 482 aaKnown RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 SGO1Q5FBB7 561 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 FRG2Q64ET8 278 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ICE2Q659A1 982 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 GRHL2Q6ISB3 625 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 CGB2Q6NT52 195 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 OGFOD3Q6PK18 319 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 EPGNQ6UW88 154 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 LRRC56Q8IYG6 542 aaPredicted RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 LINC01555Q8NAE3 123 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 CEP70Q8NHQ1 597 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 TUBGCP3Q96CW5 907 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 LRRC37BQ96QE4 947 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 FRG2BQ96QU4 278 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 OR4K3Q96R72 315 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 KCNA7Q96RP8 456 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 CENPKQ9BS16 269 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 MENTQ9BUN1 341 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 PITHD1Q9GZP4 211 aaPredicted RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 EPB41L1Q9H4G0 881 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 MEAF6Q9HAF1 191 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 C11orf16Q9NQ32 467 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 HRASLS2Q9NWW9 162 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ACTR10Q9NZ32 417 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 LRIT1Q9P2V4 623 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ADGRE2Q9UHX3 823 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ZNF490Q9ULM2 529 aaPredicted RBP9.42□□□□□ -0.9
CCM2-204ENST00000470837 SNX7Q9UNH6 387 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 BTRCQ9Y297 605 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 DNAJC15Q9Y5T4 150 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 PIKFYVEQ9Y2I7 2098 aa9.42□□□□□ -0.9
CCM2-204ENST00000470837 ANKDD1BA6NHY2 528 aa9.41□□□□□ -0.9
CCM2-204ENST00000470837 LILRA5A6NI73 299 aa9.41□□□□□ -0.9
CCM2-204ENST00000470837 PATE3B3GLJ2 98 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms