RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ABHD18Q0P651 414 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 LRRC74AQ0VAA2 488 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 BOP1Q14137 746 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 CPSF6Q16630 551 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMC4-212ENST00000470240 CDKN3Q16667 212 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 C18orf21Q32NC0 220 aaPredicted RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 USP39Q53GS9 565 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 PRRT3Q5FWE3 981 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 SPANXN4Q5MJ08 99 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 RBM48Q5RL73 367 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 LDLRAP1Q5SW96 308 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 BROXQ5VW32 411 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 LIPJQ5W064 366 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ERAP2Q6P179 960 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ISLR2Q6UXK2 745 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 DLEU7Q6UYE1 221 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 NECAB2Q7Z6G3 386 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 TSPAN33Q86UF1 283 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 GPR180Q86V85 440 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 RALGPS2Q86X27 583 aaPredicted RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 HIPK1Q86Z02 1210 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 DTWD1Q8N5C7 304 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 KREMEN2Q8NCW0 462 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 GPR26Q8NDV2 337 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 SETD9Q8NE22 299 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 VPS37AQ8NEZ2 397 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 OR10A6Q8NH74 314 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 BPIFB1Q8TDL5 484 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ASZ1Q8WWH4 475 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 LZICQ8WZA0 190 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ELMO1Q92556 727 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 GTF2H4Q92759 462 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 TMEM159Q96B96 161 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 TESCQ96BS2 214 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 EID2BQ96D98 161 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 AURKBQ96GD4 344 aaPredicted RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 METTL2AQ96IZ6 378 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 RPL10LQ96L21 214 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 HBEGFQ99075 208 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 TUBA1CQ9BQE3 449 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 HEPHQ9BQS7 1158 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ZSCAN5AQ9BUG6 496 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 FAM83DQ9H4H8 585 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 PIF1Q9H611 641 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 RPF2Q9H7B2 306 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 BRD9Q9H8M2 597 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 C11orf16Q9NQ32 467 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 HPS4Q9NQG7 708 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 DDX18Q9NVP1 670 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 TMEM9Q9P0T7 183 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 IFT80Q9P2H3 777 aaPredicted RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 ATXN10Q9UBB4 475 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ZNF639Q9UID6 485 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 C3orf18Q9UK00 162 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 TBX21Q9UL17 535 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 PDE10AQ9Y233 779 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 SNX5Q9Y5X3 404 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ST14Q9Y5Y6 855 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 ZFC3H1O60293 1989 aaKnown RBP7.78□□□□□ -1.16
SMC4-212ENST00000470240 ANKRD12Q6UB98 2062 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
SMC4-212ENST00000470240 IGLV3-16A0A075B6K0 115 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 A0A0U1RQS6 177 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 EME2A4GXA9 379 aaPredicted RBP7.77□□□□□ -1.17
SMC4-212ENST00000470240 A8MX80 341 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 UPK3BL1B0FP48 263 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 WASH3PC4AMC7 463 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 UPK3BL2E5RIL1 263 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 NPIPB8E9PQR5 432 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 RFXANKO14593 260 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 ZNF197O14709 1029 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 WNT9AO14904 365 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 PER2O15055 1255 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 ANKRD28O15084 1053 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 DFNA5O60443 496 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 LILRB5O75023 590 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 ATG13O75143 517 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 FGF18O76093 207 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 EPN2O95208 641 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 PRAMEF12O95522 483 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 CXCL14O95715 111 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 PDYNP01213 254 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 GSTM1P09488 218 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 C1SP09871 688 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 BCKDHAP12694 445 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 JUPP14923 745 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 GRNP28799 593 aaKnown RBP7.77□□□□□ -1.17
SMC4-212ENST00000470240 GKP32189 559 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 CCR7P32248 378 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 HPCAL1P37235 193 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 HNF4AP41235 474 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 GDF5P43026 501 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 KIR3DL1P43629 444 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 ASMTP46597 345 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 TRPC1P48995 793 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 STK19P49842 368 aaPredicted RBP7.77□□□□□ -1.17
SMC4-212ENST00000470240 HLCSP50747 726 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 ST8SIA6P61647 398 aa7.77□□□□□ -1.17
SMC4-212ENST00000470240 WDR5P61964 334 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms