RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 DTX1Q86Y01 620 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 SPACA3Q8IXA5 215 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 UBLCP1Q8WVY7 318 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.9□□□□□ -0.57e-8■■■■■ 36.2
CHPF2-202ENST00000465601 N4BP2L2Q92802 583 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 ZUFSPQ96AP4 578 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 PTERQ96BW5 349 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 FBXL8Q96CD0 374 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 DPH7Q9BTV6 452 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 CHRNA10Q9GZZ6 450 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 SPRTNQ9H040 489 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 SLC6A20Q9NP91 592 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 CCDC177Q9NQR7 707 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 SERTAD3Q9UJW9 196 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TLK1Q9UKI8 766 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 PILRAQ9UKJ1 303 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 ACOT9Q9Y305 439 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-202ENST00000465601 OARD1Q9Y530 152 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 CFAP47Q6ZTR5 3102 aa11.9□□□□□ -0.5
CHPF2-202ENST00000465601 CACNA1GO43497 2377 aa11.9□□□□□ -0.51
CHPF2-202ENST00000465601 KMT2BQ9UMN6 2715 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 SCN3AQ9NY46 2000 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 A0A087WV48 116 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 A0A096LPK6 155 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 TRIM49D1C9J1S8 452 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 NRP2O60462 931 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 RAD1O60671 282 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 CTSVO60911 334 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 KRT38O76015 456 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 DLGAP3O95886 979 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 ALDOAP04075 364 aaKnown RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 CTSBP07858 339 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 ANXA5P08758 320 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 LTA4HP09960 611 aaKnown RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 MSL3P1P0C860 447 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 GCAP28676 217 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 KCNC1P48547 511 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 SERPINB8P50452 374 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 ITGA1P56199 1179 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 IRF9Q00978 393 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 SRSF6Q13247 344 aaKnown RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 COL9A2Q14055 689 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 PRAMEF13Q5VWM6 474 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 CAPN13Q6MZZ7 669 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 FRA10AC1Q70Z53 315 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 TAOK1Q7L7X3 1001 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 GPSM1Q86YR5 675 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 TMEM126BQ8IUX1 230 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 MCATQ8IVS2 390 aaKnown RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 CACNA2D3Q8IZS8 1091 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 GALNT6Q8NCL4 622 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 OR8K5Q8NH50 307 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 OR56A3Q8NH54 315 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 ATL1Q8WXF7 558 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 NKD1Q969G9 470 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 KIAA1191Q96A73 305 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 PYCR2Q96C36 320 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 FCRL4Q96PJ5 515 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 EGFL8Q99944 293 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 DHRS4Q9BTZ2 278 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 DPH1Q9BZG8 443 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 VPS11Q9H270 941 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 ALG9Q9H6U8 611 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 NMRAL1Q9HBL8 299 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 IGSF5Q9NSI5 407 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-202ENST00000465601 EURLQ9NYK6 297 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 PLCL2Q9UPR0 1127 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 SH2B3Q9UQQ2 575 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 KLK4Q9Y5K2 254 aa11.89□□□□□ -0.51
CHPF2-202ENST00000465601 A0A087X1B8 175 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 IGKV1-8A0A0C4DH67 115 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 A0A0J9YVX5 310 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 OR2A25A4D2G3 310 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NCF1BA6NI72 391 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NCF1CA8MVU1 366 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 H7BY64 318 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 SCRG1O75711 98 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 OR2B3O76000 313 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 CCNDBP1O95273 360 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 SNRPAP09012 282 aaKnown RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NCF1P14598 390 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NPPBP16860 134 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 TFEBP19484 476 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 CSRP3P50461 194 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 ABATP80404 500 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 CDKL1Q00532 357 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 TLE3Q04726 772 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NAA30Q147X3 362 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 TGFBIQ15582 683 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 TAF1BQ53T94 588 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 ZC3H12BQ5HYM0 836 aaKnown RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 WDR93Q6P2C0 686 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms